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Prediction of protein cleavage sites by the barley cysteine endoproteases EP-A and EP-B based on the kinetics of synthetic peptide hydrolysis.基于合成肽水解动力学,利用大麦半胱氨酸内肽酶EP - A和EP - B预测蛋白质裂解位点
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本文引用的文献

1
A Proteinase from Germinated Barley : II. Hydrolytic Specificity of a 30 Kilodalton Cysteine Proteinase From Green Malt.来自发芽大麦的一种蛋白酶:II. 绿色麦芽中一种30千道尔顿半胱氨酸蛋白酶的水解特异性
Plant Physiol. 1990 Nov;94(3):1062-70. doi: 10.1104/pp.94.3.1062.
2
A major gibberellic Acid-induced barley aleurone cysteine proteinase which digests hordein : purification and characterization.大麦糊粉层半胱氨酸蛋白酶的大规模赤霉素诱导及其对麦醇溶蛋白的消化作用:纯化与特性。
Plant Physiol. 1990 Sep;94(1):251-8. doi: 10.1104/pp.94.1.251.
3
A Proteinase from Germinating Barley : I. Purification and Some Physical Properties of a 30 kD Cysteine Endoproteinase from Green Malt.从发芽大麦中分离的一种蛋白酶 I. 30kD 半胱氨酸内肽酶的纯化和某些物理性质
Plant Physiol. 1988 Dec;88(4):1454-60. doi: 10.1104/pp.88.4.1454.
4
Purification and characterization of gibberellic Acid-induced cysteine endoproteases in barley aleurone layers.大麦糊粉层中赤霉素诱导的半胱氨酸内肽酶的纯化和特性。
Plant Physiol. 1988 May;87(1):95-103. doi: 10.1104/pp.87.1.95.
5
Purification and partial characterization of a 31-kDa cysteine endopeptidase from germinated barley.来自发芽大麦的一种31 kDa半胱氨酸内肽酶的纯化及部分特性分析
Planta. 1996;199(4):565-72. doi: 10.1007/BF00195188.
6
Conserved cystatin segments as models for designing specific substrates and inhibitors of cysteine proteinases.保守的半胱氨酸蛋白酶抑制剂片段作为设计半胱氨酸蛋白酶特异性底物和抑制剂的模型。
J Protein Chem. 1995 Nov;14(8):645-53. doi: 10.1007/BF01886903.
7
Synthesis of N alpha-protected aminoacyl 7-amino-4-methyl-coumarin amide by phosphorous oxychloride and preparation of specific fluorogenic substrates for papain.用三氯氧磷合成Nα-保护的氨酰基7-氨基-4-甲基香豆素酰胺及木瓜蛋白酶特异性荧光底物的制备
Pept Res. 1996 Mar-Apr;9(2):92-6.
8
A new, sensitive fluorogenic substrate for papain based on the sequence of the cystatin inhibitory site.一种基于半胱氨酸蛋白酶抑制剂抑制位点序列的新型、灵敏的木瓜蛋白酶荧光底物。
Arch Biochem Biophys. 1993 Nov 1;306(2):304-8. doi: 10.1006/abbi.1993.1516.
9
A beta-turn rich barley seed protein is correctly folded in Escherichia coli.一种富含β-转角的大麦种子蛋白在大肠杆菌中正确折叠。
Protein Expr Purif. 1994 Aug;5(4):357-63. doi: 10.1006/prep.1994.1052.
10
Cathepsin B, Cathepsin H, and cathepsin L.组织蛋白酶B、组织蛋白酶H和组织蛋白酶L。
Methods Enzymol. 1981;80 Pt C:535-61. doi: 10.1016/s0076-6879(81)80043-2.

大麦半胱氨酸内肽酶EP - A和EP - B的底物特异性。

Substrate specificity of barley cysteine endoproteases EP-A and EP-B.

作者信息

Davy A, Svendsen I, Sørensen S O, Blom Sørensen M, Rouster J, Meldal M, Simpson D J, Cameron-Mills V

机构信息

Carlsberg Research Laboratory, Department of Chemistry and Department of Physiology, Carlsberg Laboratory, Gammel Carlsbergvej 10, DK-2500 Valby, Denmark.

出版信息

Plant Physiol. 1998 May;117(1):255-61. doi: 10.1104/pp.117.1.255.

DOI:10.1104/pp.117.1.255
PMID:9576795
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC35010/
Abstract

The cysteine endoproteases (EP)-A and EP-B were purified from green barley (Hordeum vulgare L.) malt, and their identity was confirmed by N-terminal amino acid sequencing. EP-B cleavage sites in recombinant type-C hordein were determined by N-terminal amino acid sequencing of the cleavage products, and were used to design internally quenched, fluorogenic peptide substrates. Tetrapeptide substrates of the general formula 2-aminobenzoyl-P2-P1-P1'-P2'-tyrosine(NO2)-aspartic acid, in which cleavage occurs between P1 and P1', showed that the cysteine EPs preferred phenylalanine, leucine, or valine at P2. Arginine was preferred to glutamine at P1, whereas proline at P2, P1, or P1' greatly reduced substrate kinetic specificity. Enzyme cleavage of C hordein was mainly determined by the primary sequence at the cleavage site, because elongation of substrates, based on the C hordein sequence, did not make them more suitable substrates. Site-directed mutagenesis of C hordein, in which serine or proline replaced leucine, destroyed primary cleavage sites. EP-A and EP-B were both more active than papain, mostly because of their much lower Km values.

摘要

从绿大麦(Hordeum vulgare L.)麦芽中纯化出半胱氨酸内肽酶(EP)-A和EP-B,并通过N端氨基酸测序确认了它们的身份。通过对切割产物进行N端氨基酸测序确定了重组C型大麦醇溶蛋白中EP-B的切割位点,并用于设计内部淬灭的荧光肽底物。通式为2-氨基苯甲酰基-P2-P1-P1'-P2'-酪氨酸(NO2)-天冬氨酸的四肽底物(其中切割发生在P1和P1'之间)表明,半胱氨酸内肽酶在P2处优先选择苯丙氨酸、亮氨酸或缬氨酸。在P1处,精氨酸比谷氨酰胺更受青睐,而在P2、P1或P1'处的脯氨酸会大大降低底物的动力学特异性。C型大麦醇溶蛋白的酶切主要由切割位点的一级序列决定,因为基于C型大麦醇溶蛋白序列延长底物并不会使它们成为更合适的底物。用丝氨酸或脯氨酸取代亮氨酸对C型大麦醇溶蛋白进行定点诱变,破坏了主要切割位点。EP-A和EP-B的活性均高于木瓜蛋白酶,这主要是因为它们的Km值低得多。