Bilgin N, Ehrenberg M, Ebel C, Zaccai G, Sayers Z, Koch M H, Svergun D I, Barberato C, Volkov V, Nissen P, Nyborg J
Department of Molecular Biology, The Biomedical Center, Uppsala University, Sweden.
Biochemistry. 1998 Jun 2;37(22):8163-72. doi: 10.1021/bi9802869.
Complex formation between elongation factor Tu (EF-Tu), Phe-tRNAPhe, and GTP was analyzed by small-angle neutron and X-ray scattering methods. Both techniques show that the ternary complex consists of one EF-Tu and one aminoacyl-tRNA. No shift in stoichiometry was detected when the temperature was raised from 5 to 37 degreesC, in contrast to previous observations obtained from RNase A protection experiments [Bilgin and Ehrenberg (1995) Biochemistry34, 715-719]. A small but significant increase in the radius of gyration of the complex was observed when the temperature was decreased from 37 to 5 degreesC. The X-ray solution scattering patterns were compared with those calculated from the crystal structure of the complex formed between EF-Tu from Thermus aquaticus and Phe-tRNAPhe from yeast. The comparison shows that the solution structure of the ternary complex, formed entirely from Escherichia coli components and under translationally optimal buffer conditions, is very close to the crystal structure, formed from heterologous components under very different conditions. Furthermore, for the hybrid complex in solution there is no evidence for the formation of trimers as suggested by the crystal structure.
通过小角中子散射和X射线散射方法分析了延伸因子Tu(EF-Tu)、苯丙氨酰-tRNAphe和GTP之间的复合物形成。两种技术均表明,三元复合物由一个EF-Tu和一个氨酰-tRNA组成。当温度从5℃升高到37℃时,未检测到化学计量的变化,这与先前通过核糖核酸酶A保护实验得到的观察结果[Bilgin和Ehrenberg(1995年),《生物化学》34卷,715 - 719页]相反。当温度从37℃降至5℃时,观察到复合物的回转半径有微小但显著的增加。将X射线溶液散射图谱与根据嗜热栖热菌的EF-Tu和酵母的苯丙氨酰-tRNAphe形成的复合物的晶体结构计算得到的图谱进行了比较。比较结果表明,完全由大肠杆菌成分在翻译最优缓冲条件下形成的三元复合物的溶液结构与在非常不同条件下由异源成分形成的晶体结构非常接近。此外,对于溶液中的杂合复合物,没有证据表明如晶体结构所暗示的那样形成了三聚体。