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鉴定一种由内吞作用和细胞骨架机制的假定成分所共有的新结构域。

Identification of a novel domain shared by putative components of the endocytic and cytoskeletal machinery.

作者信息

Kay B K, Yamabhai M, Wendland B, Emr S D

机构信息

Department of Pharmacology, University of Wisconsin-Madison, 53706-1532, USA.

出版信息

Protein Sci. 1999 Feb;8(2):435-8. doi: 10.1110/ps.8.2.435.

Abstract

We have identified a approximately 140 amino acid domain that is shared by a variety of proteins in budding and fission yeast, nematode, rat, mouse, frog, oat, and man. Typically, this domain is located within 20 residues of the N-terminus of the various proteins. The percent identity among the domains in the 12 proteins ranges from 42 to 93%, with 16 absolutely conserved residues: N-x(11-13)-V-x2-A-T-x(34-36)-R-x(7-8)-W-R-x3-K-x12-G-x-E-x15 -L-x11-12-D-x-G-R-x11-D-x7-R. Even though these proteins share little beyond their segment of homology, data are emerging that several of the proteins are involved in endocytosis and or regulation of cytoskeletal organization. We have named this protein segment the ENTH domain, for Epsin N-terminal Homology domain, and hypothesize that it is a candidate for binding specific ligands and/or enzymatic activity in the cell.

摘要

我们已经鉴定出一个约140个氨基酸的结构域,它存在于出芽酵母、裂殖酵母、线虫、大鼠、小鼠、青蛙、燕麦和人类的多种蛋白质中。通常,该结构域位于各种蛋白质N端的20个残基范围内。这12种蛋白质中该结构域的同源性百分比在42%至93%之间,有16个绝对保守的残基:N-x(11 - 13)-V-x2-A-T-x(34 - 36)-R-x(7 - 8)-W-R-x3-K-x12-G-x-E-x15 -L-x11 - 12-D-x-G-R-x11-D-x7-R。尽管这些蛋白质除了同源片段外几乎没有其他共同之处,但越来越多的数据表明其中几种蛋白质参与内吞作用和/或细胞骨架组织的调节。我们将这个蛋白质片段命名为ENTH结构域,即epsin N端同源结构域,并推测它可能是细胞中结合特定配体和/或具有酶活性的候选者。

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