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小鼠基因组包含两个已表达的无内含子反转座假基因,它们对应于类泛素化酶Ubc9。

The mouse genome contains two expressed intronless retroposed pseudogenes for the sentrin/sumo-1/PIC1 conjugating enzyme Ubc9.

作者信息

Tsytsykova A V, Tsitsikov E N, Wright D A, Futcher B, Geha R S

机构信息

Children's Hospital and Department of Pediatrics, Harvard Medical School, Boston, MA 02115, USA.

出版信息

Mol Immunol. 1998 Nov;35(16):1057-67. doi: 10.1016/s0161-5890(98)00094-7.

DOI:10.1016/s0161-5890(98)00094-7
PMID:10068040
Abstract

The ubiquitin conjugating (ubc) E2 enzyme ubc-9 conjugates the ubiquitin-like peptide sentrin/SUMO-1/PIC1 to target proteins which include the Fas antigen. We show that the mouse genome contains four copies of the ubc-9 gene. These include a structural ubc-9 gene consisting of seven exons which encode a protein identical to human ubc-9, and three intronless processed pseudogenes. The open reading frames (ORF) of two of the pseudogenes, ubc9-psi1 and ubc9-psi2, correspond to the cDNA of ubc-9 and encode for proteins which differ from ubc9 by three and one amino acid substitutions respectively. The third pseudogene, ubc9-psi3, contains many mutations and stop codons. ubc9-psi1 and ubc9-psi2 are flanked by 5'- and 3'-untranslated (UT) regions homologous to those of the structural ubc-9 gene. Both genes contain a polyA tail and direct repeats at both ends suggesting that they arose by mRNA retroposition. Both ubc9-psi1 and ubc9-psi2 are transcribed into mRNA in murine cells. In contrast to ubc9, the protein products of ubc9-psil and ubc9-psi2 fail to bind Fas and to complement an yeast conditional ubc9 mutant. These results suggest that ubc9-psi1 and ubc9-psi2 encode for proteins that may interact with targets that differ from those recognized by ubc-9.

摘要

泛素缀合(ubc)E2酶ubc - 9将类泛素肽sentrin/SUMO - 1/PIC1缀合到包括Fas抗原在内的靶蛋白上。我们发现小鼠基因组包含四个ubc - 9基因拷贝。其中包括一个由七个外显子组成的结构ubc - 9基因,其编码的蛋白质与人类ubc - 9相同,以及三个无内含子的加工假基因。两个假基因ubc9 - psi1和ubc9 - psi2的开放阅读框(ORF)与ubc - 9的cDNA相对应,分别编码与ubc9有三个和一个氨基酸替换差异的蛋白质。第三个假基因ubc9 - psi3含有许多突变和终止密码子。ubc9 - psi1和ubc9 - psi2两侧是与结构ubc - 9基因同源的5'和3'非翻译(UT)区域。这两个基因都含有聚腺苷酸尾并且两端有直接重复序列,表明它们是通过mRNA逆转座产生的。ubc9 - psi1和ubc9 - psi2在小鼠细胞中都转录成mRNA。与ubc9不同,ubc9 - psil和ubc9 - psi2的蛋白质产物不能结合Fas,也不能互补酵母条件性ubc9突变体。这些结果表明ubc9 - psi1和ubc9 - psi2编码的蛋白质可能与ubc - 9识别的靶标不同的靶标相互作用。

相似文献

1
The mouse genome contains two expressed intronless retroposed pseudogenes for the sentrin/sumo-1/PIC1 conjugating enzyme Ubc9.小鼠基因组包含两个已表达的无内含子反转座假基因,它们对应于类泛素化酶Ubc9。
Mol Immunol. 1998 Nov;35(16):1057-67. doi: 10.1016/s0161-5890(98)00094-7.
2
Preferential interaction of sentrin with a ubiquitin-conjugating enzyme, Ubc9.泛素样蛋白与泛素结合酶Ubc9的优先相互作用。
J Biol Chem. 1997 Nov 7;272(45):28198-201. doi: 10.1074/jbc.272.45.28198.
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Characterization of mouse ubiquitin-like SMT3A and SMT3B cDNAs and gene/pseudogenes.小鼠泛素样蛋白SMT3A和SMT3B的cDNA以及基因/假基因的特征分析
Biochem Mol Biol Int. 1998 Dec;46(6):1161-74. doi: 10.1080/15216549800204722.
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Role of an N-terminal site of Ubc9 in SUMO-1, -2, and -3 binding and conjugation.泛素结合酶9(Ubc9)的N端位点在小泛素样修饰蛋白1(SUMO-1)、-2和-3结合及缀合中的作用
Biochemistry. 2003 Aug 26;42(33):9959-69. doi: 10.1021/bi0345283.
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Association of human fas (CD95) with a ubiquitin-conjugating enzyme (UBC-FAP).人类Fas(CD95)与泛素结合酶(UBC-FAP)的关联。
J Biol Chem. 1996 Dec 6;271(49):31037-43. doi: 10.1074/jbc.271.49.31037.
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Ubch9 conjugates SUMO but not ubiquitin.泛素结合酶9(Ubch9)可结合小泛素样修饰物(SUMO),但不结合泛素。
FEBS Lett. 1997 Nov 17;417(3):297-300. doi: 10.1016/s0014-5793(97)01305-7.
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The ubiquitin-like proteins SMT3 and SUMO-1 are conjugated by the UBC9 E2 enzyme.类泛素蛋白SMT3和SUMO-1由E2酶UBC9缀合。
Proc Natl Acad Sci U S A. 1998 Jan 20;95(2):560-4. doi: 10.1073/pnas.95.2.560.
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Interaction of Daxx, a Fas binding protein, with sentrin and Ubc9.Fas结合蛋白Daxx与泛素样蛋白及泛素结合酶9的相互作用。
Biochem Biophys Res Commun. 2000 Dec 9;279(1):6-10. doi: 10.1006/bbrc.2000.3882.
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Caenorhabditis elegans UBC-1, a ubiquitin-conjugating enzyme homologous to yeast RAD6/UBC2, contains a novel carboxy-terminal extension that is conserved in nematodes.秀丽隐杆线虫的UBC-1是一种与酵母RAD6/UBC2同源的泛素结合酶,它含有一个在 nematodes 中保守的新型羧基末端延伸序列。 (注:这里 nematodes 直接保留英文,因为它是生物学专业术语,常见释义为“线虫类”,如果没有特别要求,一般不强行翻译为中文)
DNA Cell Biol. 1995 Oct;14(10):883-91. doi: 10.1089/dna.1995.14.883.
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The binding interface between an E2 (UBC9) and a ubiquitin homologue (UBL1).泛素结合酶E2(UBC9)与泛素同源物(UBL1)之间的结合界面。
J Biol Chem. 1999 Jun 11;274(24):16979-87. doi: 10.1074/jbc.274.24.16979.

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