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莱茵衣藻精氨琥珀酸裂解酶基因:cDNA的克隆及其作为可选择穿梭标记的特性分析

The argininosuccinate lyase gene of Chlamydomonas reinhardtii: cloning of the cDNA and its characterization as a selectable shuttle marker.

作者信息

Auchincloss A H, Loroch A I, Rochaix J D

机构信息

Department of Molecular Biology, University of Geneva, Switzerland.

出版信息

Mol Gen Genet. 1999 Feb;261(1):21-30. doi: 10.1007/s004380050937.

Abstract

We describe the cDNA sequence for ARG7, the gene that encodes argininosuccinate lyase--a selectable nuclear marker--in Chlamydomonas reinhardtii. The 5' end of the cDNA contains one more exon and the organisation of the mRNA is different from that predicted from the genomic sequence. When expressed under the control of the endogenous RbcS2 promoter, the 2.22-kb cDNA complements the arg7 mutation as well as the genomic DNA. A linear cDNA fragment lacking promoter sequences is also able to complement, suggesting that it could be used in promoter-trapping experiments. Despite the presence of a sequence encoding a potential chloroplast transit peptide in the cDNA the protein is not targeted to the chloroplast, nor can it complement the arg7 mutation when expressed there. By inserting a T7 bacteriophage promoter into the plasmid, a version of the cDNA which is able to complement both the C. reinhardtii arg7 mutant and the Escherichia coli argH mutant has been created. This modified Arg7 cDNA provides two advantages over the genomic DNA currently in use for gene tagging: it is shorter (6.2 kb versus 11.9 kb for pARG7.8phi3), and the selectable marker used in C. reinhardtii is the same as that used in E. coli, making plasmid rescue of the tag much more likely to succeed.

摘要

我们描述了莱茵衣藻中编码精氨琥珀酸裂解酶(一种可选择的核标记)的基因ARG7的cDNA序列。该cDNA的5'端含有一个额外的外显子,其mRNA的结构与根据基因组序列预测的不同。当在其内源性RbcS2启动子的控制下表达时,这个2.22kb的cDNA能够互补arg7突变以及基因组DNA。一个缺少启动子序列的线性cDNA片段也能够互补,这表明它可用于启动子捕获实验。尽管在cDNA中存在编码潜在叶绿体转运肽的序列,但该蛋白并不靶向叶绿体,在叶绿体中表达时也不能互补arg7突变。通过将T7噬菌体启动子插入质粒,已构建出一种既能互补莱茵衣藻arg7突变体又能互补大肠杆菌argH突变体的cDNA版本。这种经过修饰的Arg7 cDNA相对于目前用于基因标签的基因组DNA具有两个优点:它更短(6.2kb,而pARG7.8phi3为11.9kb),并且莱茵衣藻中使用的可选择标记与大肠杆菌中使用的相同,使得标签的质粒拯救更有可能成功。

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