Paavola P, Avela K, Horelli-Kuitunen N, Bärlund M, Kallioniemi A, Idänheimo N, Kyttälä M, de la Chapelle A, Palotie A, Lehesjoki A E, Peltonen L
National Public Health Institute, Department of Human Molecular Genetics, 00300 Helsinki, Finland.
Genome Res. 1999 Mar;9(3):267-76.
Previously, we assigned the genes for two autosomal recessive disorders, Meckel syndrome (MKS; MIM 249000) and Mulibrey Nanism [MUL (muscle-liver-brain-eye Nanism); MIM 253250] that are enriched in the Finnish population, to overlapping genomic regions on chromosome 17q. Now, we report the construction of a bacterial clone contig over the critical region for both disorders. Several novel CA-repeat markers were isolated from these clones, which allowed refined mapping of the MKS and MUL loci using haplotype and linkage disequilibrium analysis. The localization of the MKS locus was narrowed to <1 cM between markers D17S1290 and 132-CA, within an approximately 800-kb region. The MUL locus was refined into an approximately 1400-kb interval between markers D17S1290 and 52-CA. The whole MKS region falls within the MUL region. In the common critical region, the conserved haplotypes were different in MKS and MUL patients. A trancript map was constructed by assigning expressed sequence tags (ESTs) and genes, derived from the human gene map, to the bacterial clone contig. Altogether, four genes and a total of 20 ESTs were precisely localized. These data provide the molecular tools for the final identification of the MKS and the MUL genes.
此前,我们将两种在芬兰人群中富集的常染色体隐性疾病——梅克尔综合征(MKS;MIM 249000)和穆利布雷侏儒症[MUL(肌肉-肝脏-脑-眼侏儒症);MIM 253250]的相关基因,定位到了17号染色体q臂上的重叠基因组区域。现在,我们报告了针对这两种疾病关键区域构建的一个细菌克隆重叠群。从这些克隆中分离出了几个新的CA重复标记,利用单倍型和连锁不平衡分析对MKS和MUL基因座进行了精细定位。MKS基因座的定位被缩小到标记D17S1290和132-CA之间小于1厘摩的范围内,位于一个约800千碱基对的区域内。MUL基因座被精细定位到标记D17S1290和52-CA之间一个约1400千碱基对的区间内。整个MKS区域位于MUL区域内。在共同的关键区域,MKS和MUL患者的保守单倍型不同。通过将源自人类基因图谱的表达序列标签(EST)和基因定位到细菌克隆重叠群上,构建了一个转录图谱。总共精确地定位了4个基因和20个EST。这些数据为最终鉴定MKS和MUL基因提供了分子工具。