Turoverov K K, Kuznetsova I M
Institute of Cytology, Russian Academy of Sciences, St. Petersburg, Russia.
Bioorg Khim. 1998 Dec;24(12):893-8.
The contribution of individual Trp residues to alpha-actin fluorescence was evaluated by means of an analysis of their microenvironment, which was done on the basis of PIR-International protein sequence database information. The contribution of Trp79 and Trp86 was shown to be low due to an effective nonradiating energy transfer according to the inductive resonance mechanism between the Trp residues and the fluorescence quenching of Trp86 by S gamma of Cys10, an efficient fluorescence quencher. The intrinsic fluorescence of actin was found to be determined mainly by Trp340 and Trp356, which are internal, inaccessible to solvent, and have a high density microenvironment formed mainly by nonpolar groups of protein. It is possible that the side chain conformation of Trp340 (t-isomer; chi 1 190 degrees, chi 2 89 degrees), aromatic rings of Tyr and Phe residues, and Pro residues in the microenvironment of Trp340 and Trp356 substantially contribute to the short-wavelength fluorescence spectrum of actin.
通过对单个色氨酸(Trp)残基微环境的分析,评估了它们对α-肌动蛋白荧光的贡献,该分析是基于国际蛋白质信息资源(PIR)数据库中的信息进行的。由于色氨酸残基之间存在诱导共振机制,色氨酸79(Trp79)和色氨酸86(Trp86)通过有效而非辐射性的能量转移,且色氨酸86被高效荧光淬灭剂半胱氨酸10(Cys10)的硫γ(Sγ)淬灭,所以它们的贡献较低。肌动蛋白的固有荧光主要由色氨酸340(Trp340)和色氨酸356(Trp356)决定,它们位于内部,溶剂无法接触到,并且具有主要由蛋白质的非极性基团形成的高密度微环境。色氨酸340的侧链构象(t-异构体;χ1 190°,χ2 89°)、色氨酸340和色氨酸356微环境中的酪氨酸(Tyr)和苯丙氨酸(Phe)残基的芳香环以及脯氨酸(Pro)残基,可能对肌动蛋白的短波长荧光光谱有显著贡献。