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Nematode pyruvate dehydrogenase kinases: role of the C-terminus in binding to the dihydrolipoyl transacetylase core of the pyruvate dehydrogenase complex.线虫丙酮酸脱氢酶激酶:C末端在与丙酮酸脱氢酶复合体二氢硫辛酰胺转乙酰酶核心结合中的作用
Biochem J. 1999 Apr 1;339 ( Pt 1)(Pt 1):103-9.
2
Molecular cloning, functional expression, and characterization of pyruvate dehydrogenase kinase from anaerobic muscle of the parasitic nematode Ascaris suum.猪蛔虫厌氧肌肉中丙酮酸脱氢酶激酶的分子克隆、功能表达及特性分析
Arch Biochem Biophys. 1998 May 1;353(1):181-9. doi: 10.1006/abbi.1998.0627.
3
Identification of a novel dihydrolipoyl dehydrogenase-binding protein in the pyruvate dehydrogenase complex of the anaerobic parasitic nematode, Ascaris suum.在猪蛔虫这一厌氧寄生线虫的丙酮酸脱氢酶复合体中鉴定出一种新型二氢硫辛酰胺脱氢酶结合蛋白。
J Biol Chem. 1996 Mar 8;271(10):5451-7. doi: 10.1074/jbc.271.10.5451.
4
Role of dihydrolipoyl dehydrogenase (E3) and a novel E3-binding protein in the NADH sensitivity of the pyruvate dehydrogenase complex from anaerobic mitochondria of the parasitic nematode, Ascaris suum.二氢硫辛酰胺脱氢酶(E3)和一种新型E3结合蛋白在猪蛔虫厌氧线粒体丙酮酸脱氢酶复合体对NADH敏感性中的作用
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5
The pyruvate dehydrogenase complex from the parasitic nematode Ascaris suum: novel subunit composition and domain structure of the dihydrolipoyl transacetylase component.
Arch Biochem Biophys. 1992 Jul;296(1):115-21. doi: 10.1016/0003-9861(92)90552-8.
6
Expression of pyruvate dehydrogenase isoforms during the aerobic/anaerobic transition in the development of the parasitic nematode Ascaris suum: altered stoichiometry of phosphorylation/inactivation.猪蛔虫发育过程中需氧/厌氧转变期间丙酮酸脱氢酶同工型的表达:磷酸化/失活化学计量的改变
Arch Biochem Biophys. 1998 Apr 15;352(2):263-70. doi: 10.1006/abbi.1998.0596.
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R-lipoic acid inhibits mammalian pyruvate dehydrogenase kinase.R-硫辛酸抑制哺乳动物丙酮酸脱氢酶激酶。
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Lipoyl domain-based mechanism for the integrated feedback control of the pyruvate dehydrogenase complex by enhancement of pyruvate dehydrogenase kinase activity.基于硫辛酰结构域的机制,通过增强丙酮酸脱氢酶激酶活性对丙酮酸脱氢酶复合体进行整合反馈控制。
J Biol Chem. 1996 Jan 12;271(2):653-62. doi: 10.1074/jbc.271.2.653.
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Structure/function relationships in the pyruvate dehydrogenase complex from Azotobacter vinelandii. Role of the linker region between the binding and catalytic domain of the dihydrolipoyl transacetylase component.棕色固氮菌丙酮酸脱氢酶复合体的结构/功能关系。二氢硫辛酰胺转乙酰酶组分结合结构域与催化结构域之间连接区的作用。
Eur J Biochem. 1993 Feb 1;211(3):591-9. doi: 10.1111/j.1432-1033.1993.tb17586.x.
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J Biol Chem. 1997 Mar 7;272(10):6361-9. doi: 10.1074/jbc.272.10.6361.

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本文引用的文献

1
Expression of pyruvate dehydrogenase isoforms during the aerobic/anaerobic transition in the development of the parasitic nematode Ascaris suum: altered stoichiometry of phosphorylation/inactivation.猪蛔虫发育过程中需氧/厌氧转变期间丙酮酸脱氢酶同工型的表达:磷酸化/失活化学计量的改变
Arch Biochem Biophys. 1998 Apr 15;352(2):263-70. doi: 10.1006/abbi.1998.0596.
2
Molecular cloning, functional expression, and characterization of pyruvate dehydrogenase kinase from anaerobic muscle of the parasitic nematode Ascaris suum.猪蛔虫厌氧肌肉中丙酮酸脱氢酶激酶的分子克隆、功能表达及特性分析
Arch Biochem Biophys. 1998 May 1;353(1):181-9. doi: 10.1006/abbi.1998.0627.
3
Evidence for existence of tissue-specific regulation of the mammalian pyruvate dehydrogenase complex.哺乳动物丙酮酸脱氢酶复合体存在组织特异性调节的证据。
Biochem J. 1998 Jan 1;329 ( Pt 1)(Pt 1):191-6. doi: 10.1042/bj3290191.
4
Dihydrolipoamide dehydrogenase-binding protein of the human pyruvate dehydrogenase complex. DNA-derived amino acid sequence, expression, and reconstitution of the pyruvate dehydrogenase complex.人丙酮酸脱氢酶复合体的二氢硫辛酰胺脱氢酶结合蛋白。丙酮酸脱氢酶复合体的DNA衍生氨基酸序列、表达及重组。
J Biol Chem. 1997 Aug 8;272(32):19746-51. doi: 10.1074/jbc.272.32.19746.
5
Refolding and reconstitution studies on the transacetylase-protein X (E2/X) subcomplex of the mammalian pyruvate dehydrogenase complex: evidence for specific binding of the dihydrolipoamide dehydrogenase component to sites on reassembled E2.哺乳动物丙酮酸脱氢酶复合体转乙酰酶-蛋白X(E2/X)亚复合体的重折叠与重组研究:二氢硫辛酰胺脱氢酶组分与重组E2上位点特异性结合的证据
Biochemistry. 1997 Jun 3;36(22):6819-26. doi: 10.1021/bi9630016.
6
Reconstitution of mammalian pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes: analysis of protein X involvement and interaction of homologous and heterologous dihydrolipoamide dehydrogenases.哺乳动物丙酮酸脱氢酶和2-氧代戊二酸脱氢酶复合物的重组:蛋白质X参与情况及同源和异源二氢硫辛酰胺脱氢酶相互作用的分析
Biochem J. 1996 Oct 1;319 ( Pt 1)(Pt 1):109-16. doi: 10.1042/bj3190109.
7
Cloning and characterization of PDK4 on 7q21.3 encoding a fourth pyruvate dehydrogenase kinase isoenzyme in human.位于7q21.3的编码人丙酮酸脱氢酶激酶第四种同工酶的PDK4的克隆与特性分析
J Biol Chem. 1996 Sep 13;271(37):22376-82. doi: 10.1074/jbc.271.37.22376.
8
Pyruvate dehydrogenase complex from the primitive insect trypanosomatid, Crithidia fasciculata: dihydrolipoyl dehydrogenase-binding protein has multiple lipoyl domains.来自原始昆虫锥虫类生物克氏锥虫的丙酮酸脱氢酶复合物:二氢硫辛酰胺脱氢酶结合蛋白具有多个硫辛酰结构域。
Mol Biochem Parasitol. 1995 Dec;75(1):87-97. doi: 10.1016/0166-6851(95)02498-0.
9
Identification of a novel dihydrolipoyl dehydrogenase-binding protein in the pyruvate dehydrogenase complex of the anaerobic parasitic nematode, Ascaris suum.在猪蛔虫这一厌氧寄生线虫的丙酮酸脱氢酶复合体中鉴定出一种新型二氢硫辛酰胺脱氢酶结合蛋白。
J Biol Chem. 1996 Mar 8;271(10):5451-7. doi: 10.1074/jbc.271.10.5451.
10
Lipoyl domain-based mechanism for the integrated feedback control of the pyruvate dehydrogenase complex by enhancement of pyruvate dehydrogenase kinase activity.基于硫辛酰结构域的机制,通过增强丙酮酸脱氢酶激酶活性对丙酮酸脱氢酶复合体进行整合反馈控制。
J Biol Chem. 1996 Jan 12;271(2):653-62. doi: 10.1074/jbc.271.2.653.

线虫丙酮酸脱氢酶激酶:C末端在与丙酮酸脱氢酶复合体二氢硫辛酰胺转乙酰酶核心结合中的作用

Nematode pyruvate dehydrogenase kinases: role of the C-terminus in binding to the dihydrolipoyl transacetylase core of the pyruvate dehydrogenase complex.

作者信息

Chen W, Komuniecki P R, Komuniecki R

机构信息

Department of Biology, The University of Toledo, Toledo, OH 43606-3390, USA.

出版信息

Biochem J. 1999 Apr 1;339 ( Pt 1)(Pt 1):103-9.

PMID:10085233
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1220133/
Abstract

Pyruvate dehydrogenase kinases (PDKs) from the anaerobic parasitic nematode Ascaris suum and the free-living nematode Caenorhabditis elegans were functionally expressed with hexahistidine tags at their N-termini and purified to apparent homogeneity. Both recombinant PDKs (rPDKs) were dimers, were not autophosphorylated and exhibited similar specific activities with the A. suum pyruvate dehydrogenase (E1) as substrate. In addition, the activities of both PDKs were activated by incubation with PDK-depleted A. suum muscle pyruvate dehydrogenase complex (PDC) and were stimulated by NADH and acetyl-CoA. However, the recombinant A. suum PDK (rAPDK) required higher NADH/NAD+ ratios for half-maximal stimulation than the recombinant C. elegans PDK (rCPDK) or values reported for mammalian PDKs, as might be predicted by the more reduced microaerobic mitochondrial environment of the APDK. Limited tryptic digestion of both rPDKs yielded stable fragments truncated at the C-termini (trPDKs). The trPDKs retained their dimeric structure and exhibited substantial PDK activity with the A. suum E1 as substrate, but PDK activity was not activated by incubation with PDK-depleted A. suum PDC or stimulated by elevated NADH/NAD+ or acetyl-CoA/CoA ratios. Direct-binding assays demonstrated that increasing amounts of rCPDK bound to the A. suum PDK-depleted PDC. No additional rCPDK binding was observed at ratios greater than 20 mol of rCPDK/mol of PDC. In contrast, the truncated rCPDK (trCPDK) did not exhibit significant binding to the PDC. Similarly, a truncated form of rCPDK, rCPDK1-334, generated by mutagenesis, exhibited properties similar to those observed for trCPDK. These results suggest that the C-terminus of the PDK is not required for subunit association of the homodimer or catalysis, but instead seems to be involved in the binding of the PDKs to the dihydrolipoyl transacetylase core of the complex.

摘要

来自厌氧寄生线虫猪蛔虫和自由生活线虫秀丽隐杆线虫的丙酮酸脱氢酶激酶(PDKs)在其N端带有六聚组氨酸标签进行功能表达,并纯化至表观均一。两种重组PDKs(rPDKs)均为二聚体,不会自磷酸化,并且以猪蛔虫丙酮酸脱氢酶(E1)为底物时表现出相似的比活性。此外,两种PDKs的活性通过与去除PDK的猪蛔虫肌肉丙酮酸脱氢酶复合物(PDC)孵育而被激活,并受到NADH和乙酰辅酶A的刺激。然而,重组猪蛔虫PDK(rAPDK)达到半数最大刺激所需的NADH/NAD⁺比值高于重组秀丽隐杆线虫PDK(rCPDK)或哺乳动物PDKs报道的值,这正如猪蛔虫PDK所处的微需氧线粒体环境更为还原所预测的那样。对两种rPDKs进行有限的胰蛋白酶消化产生了在C端截短的稳定片段(trPDKs)。trPDKs保留了其二聚体结构,并以猪蛔虫E1为底物表现出大量的PDK活性,但PDK活性不会通过与去除PDK的猪蛔虫PDC孵育而被激活,也不会受到升高的NADH/NAD⁺或乙酰辅酶A/辅酶A比值的刺激。直接结合试验表明,越来越多的rCPDK与去除猪蛔虫PDK的PDC结合。当rCPDK与PDC的摩尔比大于20时,未观察到额外的rCPDK结合。相比之下,截短的rCPDK(trCPDK)与PDC没有显著结合。同样,通过诱变产生的rCPDK截短形式rCPDK1 - 334表现出与trCPDK相似的特性。这些结果表明,PDK的C端对于同型二聚体的亚基缔合或催化不是必需的,而是似乎参与了PDKs与复合物的二氢硫辛酰胺转乙酰酶核心的结合。