• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

磷脂酶A2的催化位点突变体D99A和H48Q以及钙环突变体D49E的结构

Structures of the catalytic site mutants D99A and H48Q and the calcium-loop mutant D49E of phospholipase A2.

作者信息

Sekar K, Biswas R, Li Y, Tsai M, Sundaralingam M

机构信息

Biological Macromolecular Structure Center, Department of Chemistry, Ohio State Biochemistry Program, 012 Rightmire Hall, 1060 Carmack Road, The Ohio State University, Columbus, OH 43210, USA.

出版信息

Acta Crystallogr D Biol Crystallogr. 1999 Feb;55(Pt 2):443-7. doi: 10.1107/s0907444998013699.

DOI:10.1107/s0907444998013699
PMID:10089353
Abstract

Crystal structures of the active-site mutants D99A and H48Q and the calcium-loop mutant D49E of bovine phospholipase A2 have been determined at around 1.9 A resolution. The D99A mutant is isomorphous to the orthorhombic recombinant enzyme, space group P212121. The H48Q and the calcium-loop mutant D49E are isomorphous to the trigonal recombinant enzyme, space group P3121. The two active-site mutants show no major structural perturbations. The structural water is absent in D99A and, therefore, the hydrogen-bonding scheme is changed. In H48Q, the catalytic water is present and hydrogen bonded to Gln48 N, but the second water found in native His48 is absent. In the calcium-loop mutant D49E, the two water molecules forming the pentagonal bipyramid around calcium are absent and only one O atom of the Glu49 carboxylate group is coordinated to calcium, resulting in only four ligands.

摘要

已在约1.9埃分辨率下测定了牛磷脂酶A2的活性位点突变体D99A和H48Q以及钙环突变体D49E的晶体结构。D99A突变体与正交重组酶同晶型,空间群为P212121。H48Q和钙环突变体D49E与三角重组酶同晶型,空间群为P3121。两个活性位点突变体未显示出主要的结构扰动。D99A中没有结构水,因此氢键模式发生了变化。在H48Q中,催化水存在并与Gln48 N形成氢键,但天然His48中发现的第二个水不存在。在钙环突变体D49E中,围绕钙形成五角双锥的两个水分子不存在,只有Glu49羧酸盐基团的一个O原子与钙配位,导致只有四个配体。

相似文献

1
Structures of the catalytic site mutants D99A and H48Q and the calcium-loop mutant D49E of phospholipase A2.磷脂酶A2的催化位点突变体D99A和H48Q以及钙环突变体D49E的结构
Acta Crystallogr D Biol Crystallogr. 1999 Feb;55(Pt 2):443-7. doi: 10.1107/s0907444998013699.
2
High-resolution refinement of orthorhombic bovine pancreatic phospholipase A2.正交晶系牛胰磷脂酶A2的高分辨率精制
Acta Crystallogr D Biol Crystallogr. 1999 Jan;55(Pt 1):46-50. doi: 10.1107/S0907444998006568. Epub 1999 Jan 1.
3
The crystal structure of the H48Q active site mutant of human group IIA secreted phospholipase A2 at 1.5 A resolution provides an insight into the catalytic mechanism.
Biochemistry. 2002 Dec 31;41(52):15468-76. doi: 10.1021/bi020485z.
4
Structure of the complex of bovine pancreatic phospholipase A2 with a transition-state analogue.牛胰磷脂酶A2与过渡态类似物的复合物结构
Acta Crystallogr D Biol Crystallogr. 1998 May 1;54(Pt 3):334-41. doi: 10.1107/s090744499701247x.
5
Suggestive evidence for the involvement of the second calcium and surface loop in interfacial binding: monoclinic and trigonal crystal structures of a quadruple mutant of phospholipase A2.支持第二个钙和表面环参与界面结合的提示性证据:磷脂酶A2四重突变体的单斜晶系和三方晶系晶体结构
Acta Crystallogr D Biol Crystallogr. 2006 Jul;62(Pt 7):717-24. doi: 10.1107/S0907444906014855. Epub 2006 Jun 20.
6
Crystal structure of the complex of bovine pancreatic phospholipase A2 with the inhibitor 1-hexadecyl-3-(trifluoroethyl)-sn-glycero-2-phosphomethanol,牛胰磷脂酶A2与抑制剂1-十六烷基-3-(三氟乙基)-sn-甘油-2-磷酸甲醇复合物的晶体结构
Biochemistry. 1997 Nov 18;36(46):14186-91. doi: 10.1021/bi971370b.
7
Observation of additional calcium ion in the crystal structure of the triple mutant K56,120,121M of bovine pancreatic phospholipase A2.牛胰磷脂酶A2三重突变体K56、120、121M晶体结构中额外钙离子的观察
J Mol Biol. 2002 Dec 6;324(4):755-62. doi: 10.1016/s0022-2836(02)01132-4.
8
1.72 A resolution refinement of the trigonal form of bovine pancreatic phospholipase A2.1.72 牛胰磷脂酶A2三角形式的分辨率优化
Acta Crystallogr D Biol Crystallogr. 1998 May 1;54(Pt 3):342-6. doi: 10.1107/s0907444997012493.
9
Structures and molecular-dynamics studies of three active-site mutants of bovine pancreatic phospholipase A(2).牛胰磷脂酶A(2)三种活性位点突变体的结构与分子动力学研究
Acta Crystallogr D Biol Crystallogr. 2008 Oct;64(Pt 10):1003-11. doi: 10.1107/S0907444908022713. Epub 2008 Sep 19.
10
Crystal structure of the Y52F/Y73F double mutant of phospholipase A2: increased hydrophobic interactions of the phenyl groups compensate for the disrupted hydrogen bonds of the tyrosines.磷脂酶A2的Y52F/Y73F双突变体的晶体结构:苯基增加的疏水相互作用补偿了酪氨酸破坏的氢键。
Protein Sci. 1992 Dec;1(12):1585-94. doi: 10.1002/pro.5560011206.

引用本文的文献

1
Possible roles of S···O and S···N interactions in the functions and evolution of phospholipase A.S···O和S···N相互作用在磷脂酶A的功能及进化中的可能作用。
Biophysics (Nagoya-shi). 2006 Mar 10;2:23-34. doi: 10.2142/biophysics.2.23. eCollection 2006.
2
Lysis of human immunodeficiency virus type 1 by a specific secreted human phospholipase A2.一种特异性分泌的人磷脂酶A2对1型人类免疫缺陷病毒的裂解作用。
J Virol. 2007 Feb;81(3):1444-50. doi: 10.1128/JVI.01790-06. Epub 2006 Nov 8.
3
Neurotoxicity and other pharmacological activities of the snake venom phospholipase A2 OS2: the N-terminal region is more important than enzymatic activity.
蛇毒磷脂酶A2 OS2的神经毒性及其他药理活性:N端区域比酶活性更重要。
Biochemistry. 2006 May 9;45(18):5800-16. doi: 10.1021/bi060217r.
4
Atomic resolution (0.97 A) structure of the triple mutant (K53,56,121M) of bovine pancreatic phospholipase A2.牛胰磷脂酶A2三重突变体(K53、56、121M)的原子分辨率(0.97埃)结构
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 Jan 1;61(Pt 1):3-7. doi: 10.1107/S1744309104021748. Epub 2004 Sep 25.
5
Structural effects of covalent inhibition of phospholipase A2 suggest allosteric coupling between membrane binding and catalytic sites.磷脂酶A2共价抑制的结构效应表明膜结合位点与催化位点之间存在变构偶联。
Biophys J. 2003 Mar;84(3):1773-83. doi: 10.1016/S0006-3495(03)74985-6.
6
Active-site mutagenesis of a Lys49-phospholipase A2: biological and membrane-disrupting activities in the absence of catalysis.一种赖氨酸49型磷脂酶A2的活性位点诱变:无催化作用时的生物学活性和膜破坏活性
Biochem J. 2002 Feb 15;362(Pt 1):89-96. doi: 10.1042/0264-6021:3620089.