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顶头孢霉NADP-异柠檬酸脱氢酶的化学修饰:活性位点上必需组氨酸和赖氨酸基团的证据

Chemical modification of NADP-isocitrate dehydrogenase from Cephalosporium acremonium evidence of essential histidine and lysine groups at the active site.

作者信息

Olano J, Soler J, Busto F, De Arriaga D

机构信息

Departmento de Bioquímica y Biología Molecular, Universidad de León Spain.

出版信息

Eur J Biochem. 1999 May;261(3):640-9. doi: 10.1046/j.1432-1327.1999.00297.x.

Abstract

NADP-isocitrate dehydrogenase from Cephalosporium acremonium CW-19 has been inactivated by diethyl pyrocarbonate following a first-order process giving a second-order rate constant of 3.0 m-1. s-1 at pH 6.5 and 25 degrees C. The pH-inactivation rate data indicated the participation of a group with a pK value of 6.9. Quantifying the increase in absorbance at 240 nm showed that six histidine residues per subunit were modified during total inactivation, only one of which was essential for catalysis, and substrate protection analysis would seem to indicate its location at the substrate binding site. The enzyme was not inactivated by 5, 5'-dithiobis(2-nitrobenzoate), N-ethylmaleimide or iodoacetate, which would point to the absence of an essential reactive cysteine residue at the active site. Pyridoxal 5'-phosphate reversibly inactivated the enzyme at pH 7.7 and 5 degrees C, with enzyme activity declining to an equilibrium value within 15 min. The remaining activity depended on the modifier concentration up to about 2 mm. The kinetic analysis of inactivation and reactivation rate data is consistent with a reversible two-step inactivation mechanism with formation of a noncovalent enzyme-pyridoxal 5'-phosphate complex prior to Schiff base formation with a probable lysyl residue of the enzyme. The analysis of substrate protection shows the essential residue(s) to be at the active site of the enzyme and probably to be involved in catalysis.

摘要

顶头孢霉CW-19的NADP-异柠檬酸脱氢酶已被焦碳酸二乙酯按照一级反应过程灭活,在pH 6.5和25℃下得到的二级速率常数为3.0 m⁻¹·s⁻¹。pH-灭活速率数据表明存在一个pK值为6.9的基团参与反应。对240 nm处吸光度增加的定量分析表明,每个亚基在完全灭活过程中有六个组氨酸残基被修饰,其中只有一个对催化至关重要,底物保护分析似乎表明其位于底物结合位点。该酶未被5,5'-二硫代双(2-硝基苯甲酸)、N-乙基马来酰亚胺或碘乙酸灭活,这表明活性位点不存在必需的活性半胱氨酸残基。磷酸吡哆醛在pH 7.7和5℃下可逆地使该酶失活,酶活性在15分钟内降至平衡值。剩余活性取决于修饰剂浓度,最高可达约2 mM。对灭活和再激活速率数据的动力学分析与可逆的两步灭活机制一致,即在与酶的一个可能的赖氨酰残基形成席夫碱之前形成非共价的酶-磷酸吡哆醛复合物。底物保护分析表明必需残基位于酶的活性位点,可能参与催化作用。

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