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天蓝色链霉菌A3(2)中几丁质酶基因的高拷贝数

High-multiplicity of chitinase genes in Streptomyces coelicolor A3(2).

作者信息

Saito A, Fujii T, Yoneyama T, Redenbach M, Ohno T, Watanabe T, Miyashita K

机构信息

National Institute of Agro-Environmental Sciences, Ibaraki, Japan.

出版信息

Biosci Biotechnol Biochem. 1999 Apr;63(4):710-8. doi: 10.1271/bbb.63.710.

Abstract

Six different genes for chitinase from ordered cosmids of the chromosome of Streptomyces coelicolor A3(2) were identified by hybridization, using the chitinase genes from other Streptomyces spp. as probes, and cloned. The genes were sequenced and analyzed. The genes, together with an additional chitinase gene obtained from the data bank, can be classified into either family 18 or family 19 of the glycosyl hydrolase classification. The five chitinases that fall into family 18 show diversity in their multiple domain structures as well as in the amino acid sequences of their catalytic domains. The remaining two chitinases are members of family 19 chitinases, since their C-terminus shares more than 70% identity with the catalytic domain of ChiC of Streptomyces griseus, the sole gene for family 19 chitinase so far found in an organism other than higher plants.

摘要

通过杂交,以其他链霉菌属物种的几丁质酶基因作为探针,从天蓝色链霉菌A3(2)染色体的有序黏粒中鉴定出6个不同的几丁质酶基因,并进行了克隆。对这些基因进行了测序和分析。这些基因,连同从数据库中获得的另一个几丁质酶基因,可归类为糖基水解酶分类中的第18家族或第19家族。属于第18家族的5种几丁质酶在其多结构域结构以及催化结构域的氨基酸序列方面表现出多样性。其余两种几丁质酶是第19家族几丁质酶的成员,因为它们的C末端与灰色链霉菌ChiC的催化结构域具有超过70%的同一性,ChiC是迄今为止在高等植物以外的生物体中发现的第19家族几丁质酶的唯一基因。

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