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巴尔通体属60 kDa热休克蛋白基因(groEL)种内遗传变异的评估。

Evaluation of intraspecies genetic variation within the 60 kDa heat-shock protein gene (groEL) of Bartonella species.

作者信息

Marston E L, Sumner J W, Regnery R L

机构信息

Centers for Disease Control and Prevention, Bacterial & Mycotic Diseases, Atlanta, GA 30333, USA.

出版信息

Int J Syst Bacteriol. 1999 Jul;49 Pt 3:1015-23. doi: 10.1099/00207713-49-3-1015.

Abstract

A phylogenetic investigation was done on the members of the genus Bartonella, based on the DNA sequence analysis of the groEL gene, which encodes the 60 kDa heat-shock protein GroEL. Nucleotide sequence data were determined for a near full-length fragment (1368 bp) of the groEL gene of the established Bartonella species and used to infer intraspecies phylogenetic relationships. Phylogenetic trees were inferred from multiple sequence alignments by using both distance and parsimony methods, which demonstrated an architecture composed of six well-supported lineages. The results are consistent with relationships deduced from recent sequence analysis studies based upon citrate synthase (gItA) and previously observed genotypic and phenotypic characteristics; however, they showed greater statistical support at the intragenus level. This suggests that groEL may be a more robust tool for phylogenetic analysis of Bartonella lineages.

摘要

基于对编码60 kDa热休克蛋白GroEL的groEL基因的DNA序列分析,对巴尔通体属的成员进行了系统发育研究。测定了已确定的巴尔通体菌种groEL基因近全长片段(1368 bp)的核苷酸序列数据,并用于推断种内系统发育关系。通过使用距离法和简约法从多序列比对中推断系统发育树,其显示为由六个得到充分支持的谱系组成的结构。结果与基于柠檬酸合酶(gItA)的近期序列分析研究以及先前观察到的基因型和表型特征所推断的关系一致;然而,它们在属内水平上显示出更大的统计支持。这表明groEL可能是用于巴尔通体谱系系统发育分析的更可靠工具。

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