Lehoux I E, Mitra B
Department of Biochemistry and Molecular Biology, School of Medicine, Wayne State University, Detroit, Michigan 48201, USA.
Biochemistry. 1999 Aug 3;38(31):9948-55. doi: 10.1021/bi9907532.
(S)-Mandelate dehydrogenase from Pseudomonas putida, an FMN-dependent alpha-hydroxy acid dehydrogenase, oxidizes (S)-mandelate to benzoylformate. The generally accepted catalytic mechanism for this enzyme involves the formation of a carbanion intermediate. Histidine-274 has been proposed to be the active-site base that abstracts the substrate alpha-proton to generate the carbanion. Histidine-274 was altered to glycine, alanine, and asparagine. All three mutants were completely inactive. The mutants were able to form adducts with sulfite, though with much weaker affinity than the wild-type enzyme. Binding of the inhibitor, (R)-mandelate, was not greatly affected by the mutation, unlike that of the substrate, (S)-mandelate, indicating that H274 plays a role in substrate binding. The activity of H274G and, to a lesser extent, H274A could be partially restored by the addition of exogenous imidazoles. The maximum rescued activity for H274G with imidazole was approximately 0.1% of the wild-type value. Saturation kinetics obtained for rescued activity suggest that formation of a ternary complex of imidazole, enzyme, and substrate is required for catalysis. pH-dependence studies confirm that the free base form of imidazole is the rescue agent. An earlier study of pH profiles of the wild-type enzyme indicated that deprotonation of a residue with a pK(a) of 5.5 in the free enzyme was essential for activity (Lehoux, I. E., and Mitra, B. (1999) Biochemistry 38, 5836-5848). Data obtained in this work confirm that the pK(a) of 5.5 belongs to histidine-274.
来自恶臭假单胞菌的(S)-扁桃酸脱氢酶是一种依赖黄素单核苷酸的α-羟基酸脱氢酶,可将(S)-扁桃酸氧化为苯甲酰甲酸。该酶普遍接受的催化机制涉及形成碳负离子中间体。已提出组氨酸-274是活性位点碱基,可提取底物α-质子以生成碳负离子。将组氨酸-274分别突变为甘氨酸、丙氨酸和天冬酰胺。所有这三个突变体均完全无活性。这些突变体能够与亚硫酸盐形成加合物,但其亲和力比野生型酶弱得多。与底物(S)-扁桃酸不同,抑制剂(R)-扁桃酸的结合受突变影响不大,这表明H274在底物结合中起作用。添加外源咪唑可部分恢复H274G以及程度较小的H274A的活性。H274G与咪唑的最大恢复活性约为野生型值的0.1%。恢复活性的饱和动力学表明,催化需要咪唑、酶和底物形成三元复合物。pH依赖性研究证实咪唑的游离碱形式是救援剂。早期对野生型酶pH谱的研究表明,游离酶中pK(a)为5.5的残基去质子化对活性至关重要(勒胡克斯,I.E.,和米特拉,B.(1999年)《生物化学》38,5836 - 5848)。这项工作获得的数据证实pK(a)为5.5的残基属于组氨酸-274。