Zakharov S D, Lindeberg M, Cramer W A
Department of Biological Sciences, Purdue University, West Lafayette, Indiana 47907-1392, USA.
Biochemistry. 1999 Aug 31;38(35):11325-32. doi: 10.1021/bi9903087.
Upon binding to membranes, the 178-residue colicin E1 C-terminal channel protein forms a steady-state closed-channel intermediate that is a flexible extended two-dimensional helical array [Zakharov et al. (1998) Proc. Natl. Acad. Sci. U.S.A. 95, 4282-4287]. Analysis of the kinetics of binding-insertion to liposome membranes of the channel protein, P178, and of changes of spectral parameters associated with structure transitions allowed a correlation of the sequence of tertiary and secondary structure changes with binding-insertion. Binding and insertion were distinguished by use of lipids modified with quenchers of Trp fluorescence attached to lipid headgroups or acyl chains. Secondary and tertiary structure changes were inferred, respectively, from changes in far-UV circular dichroism and relative changes of interresidue distances by fluorescence resonance energy transfer (FRET). "Single Trp" mutants were used in FRET analysis, with the background Tyr contribution determined through use of a "zero Trp" mutant. The sequence of distinguishable events and the pseudo-first-order rate constants under "standard" conditions (large unilamellar vesicles, pH 4.0, I = 0.1 M) was binding (30 +/- 5 s(-)(1)) --> unfolding (12.6 +/- 0.5 s(-)(1)) --> helix elongation (9.0 +/- 1.0 s(-)(1)) --> insertion (6. 6 +/- 0.5 s(-)(1)). Thus, helix elongation on the surface of the membrane can occur after unfolding and does not require insertion. Binding-insertion and structural transitions of P178 occur significantly faster with small unilamellar vesicles. The relevance to general mechanisms of protein import of the structural changes associated with import of the colicin channel is discussed.
178个氨基酸残基的大肠杆菌素E1 C端通道蛋白与膜结合后,会形成一种稳态的闭通道中间体,它是一种灵活的伸展二维螺旋阵列[扎哈罗夫等人(1998年)。美国国家科学院院刊95,4282 - 4287]。对通道蛋白P178与脂质体膜结合插入的动力学以及与结构转变相关的光谱参数变化进行分析,使得三级和二级结构变化序列与结合插入之间建立了关联。通过使用连接在脂质头部基团或酰基链上的色氨酸荧光猝灭剂修饰的脂质来区分结合和插入。分别从远紫外圆二色性的变化以及通过荧光共振能量转移(FRET)得到的残基间距离的相对变化推断二级和三级结构变化。在FRET分析中使用了“单Trp”突变体,通过使用“零Trp”突变体确定背景酪氨酸的贡献。在“标准”条件下(大单层囊泡,pH 4.0,I = 0.1 M)可区分事件的序列和伪一级速率常数为:结合(30±5 s⁻¹)→解折叠(12.6±0.5 s⁻¹)→螺旋伸长(9.0±1.0 s⁻¹)→插入(6.6±0.5 s⁻¹)。因此,膜表面的螺旋伸长可在解折叠后发生,且不需要插入。P178的结合插入和结构转变在小单层囊泡中发生得明显更快。讨论了与大肠杆菌素通道导入相关的结构变化对蛋白质导入一般机制的相关性。