Sackett D L, Ruvinov S B, Thompson J
Laboratory of Integrative and Medical Biophysics, NICHD, National Institutes of Health, Bethesda, Maryland 20892-4855, USA.
Protein Sci. 1999 Oct;8(10):2121-9. doi: 10.1110/ps.8.10.2121.
N5-(L-1-carboxyethyl)-L-ornithine synthase [E.C. 1.5.1.24] (CEOS) from Lactococcus lactis has been cloned, expressed, and purified from Escherichia coli in quantities sufficient for characterization by biophysical methods. The NADPH-dependent enzyme is a homotetramer (Mr approximately equal to 140,000) and in the native state is stabilized by noncovalent interactions between the monomers. The far-ultraviolet circular dichroism spectrum shows that the folding pattern of the enzyme is typical of the alpha,beta family of proteins. CEOS contains one tryptophan (Trp) and 19 tyrosines (Tyr) per monomer, and the fluorescence spectrum of the protein shows emission from both Trp and Tyr residues. Relative to N-acetyltyrosinamide, the Tyr quantum yield of the native enzyme is about 0.5. All 19 Tyr residues are titratable and, of these, two exhibit the uncommonly low pKa of approximately 8.5, 11 have pKa approximately 10.75, and the remaining six titrate with pKa approximately 11.3. The two residues with pKa approximately 8.5 contribute approximately 40% of the total tyrosine emission, implying a relative quantum yield >1, probably indicating Tyr-Tyr energy transfer. In the presence of NADPH, Tyr fluorescence is reduced by 40%, and Trp fluorescence is quenched completely. The latter result suggests that the single Trp residue is either at the active site, or in proximity to the sequence GSGNVA, that constitutes the beta alphabeta fold of the nucleotide-binding domain. Chymotrypsin specifically cleaves native CEOS after Phe255. Although inactivated by this single-site cleavage of the subunit, the enzyme retains the capacity to bind NADPH and tetramer stability is maintained. Possible roles in catalysis for the chymotrypsin sensitive loop and for the low pKa Tyr residues are discussed.
已从乳酸乳球菌中克隆出N5-(L-1-羧乙基)-L-鸟氨酸合酶E.C. 1.5.1.24,并在大肠杆菌中进行表达和纯化,获得了足以通过生物物理方法进行表征的量。这种依赖NADPH的酶是一种同四聚体(Mr约为140,000),在天然状态下通过单体之间的非共价相互作用得以稳定。远紫外圆二色光谱表明,该酶的折叠模式是典型的α,β蛋白家族。每个单体的CEOS含有一个色氨酸(Trp)和19个酪氨酸(Tyr),蛋白质的荧光光谱显示来自Trp和Tyr残基的发射。相对于N-乙酰酪氨酸酰胺,天然酶的Tyr量子产率约为0.5。所有19个Tyr残基均可滴定,其中两个的pKa异常低,约为8.5,11个的pKa约为10.75,其余六个的滴定pKa约为11.3。pKa约为8.5的两个残基贡献了总酪氨酸发射的约40%,这意味着相对量子产率>1,可能表明存在Tyr-Tyr能量转移。在NADPH存在的情况下,Tyr荧光降低40%,而Trp荧光完全淬灭。后一结果表明,单个Trp残基要么位于活性位点,要么靠近构成核苷酸结合域β-α-β折叠的GSGNVA序列。胰凝乳蛋白酶在Phe255之后特异性切割天然CEOS。尽管亚基的这种单点切割使其失活,但该酶仍保留结合NADPH的能力,并且四聚体稳定性得以维持。文中讨论了胰凝乳蛋白酶敏感环和低pKa Tyr残基在催化中的可能作用。