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红螯螯虾(Cherax quadricarinatus)中一种假定纤维素酶编码cDNA的分离。

Isolation of a cDNA encoding a putative cellulase in the red claw crayfish Cherax quadricarinatus.

作者信息

Byrne K A, Lehnert S A, Johnson S E, Moore S S

机构信息

CSIRO Tropical Agriculture, Molecular Animal Genetics Centre, Level 3 Gehrmann Laboratories, University of Queensland, St. Lucia, Australia.

出版信息

Gene. 1999 Nov 1;239(2):317-24. doi: 10.1016/s0378-1119(99)00396-0.

Abstract

Amino acid sequences of cellulases have been determined in insects, nematodes, plants, slime moulds and bacteria but not in crustaceans. However, cellulase activity has been demonstrated in the hepatopancreas of the red claw crayfish, Cherax quadricarinatus. In order to obtain information on the nature of this cellulase, a C. quadricarinatus hepatopancreas cDNA library was screened with a PCR product generated using degenerate oligonucleotide primers derived from conserved regions of known cellulases. Two identical 1.56kb cDNAs with sequence similarities to known cellulases, particularly the termite endoglucanases, were identified and sequenced. The clones contain the complete cDNA open reading frame for an endo-1, 4-beta-glucanase of 469 amino acids termed Cherax quadricarinatus endoglucanase (CqEG). The endogenous origin of the gene was confirmed by PCR amplification and sequencing of a 1012bp PCR product from genomic DNA. This fragment contains four exon sequences identical to the cDNA and is interrupted by three introns of 371, 102, 194bp respectively, with one intron exhibiting typical eukaryotic splice sites. The isolation of an endo-1,4-beta-glucanase encoding cDNA from the crayfish C. quadricarinatus provides the first endogenous cellulase sequence in a crustacean species.

摘要

已测定了昆虫、线虫、植物、黏菌和细菌中纤维素酶的氨基酸序列,但尚未在甲壳类动物中测定。然而,已在红螯螯虾(Cherax quadricarinatus)的肝胰腺中证实了纤维素酶活性。为了获取有关这种纤维素酶性质的信息,用由已知纤维素酶保守区域衍生的简并寡核苷酸引物生成的PCR产物筛选了红螯螯虾肝胰腺cDNA文库。鉴定并测序了两个与已知纤维素酶,特别是白蚁内切葡聚糖酶具有序列相似性的1.56kb相同cDNA。这些克隆包含一个469个氨基酸的内切-1,4-β-葡聚糖酶的完整cDNA开放阅读框,称为红螯螯虾内切葡聚糖酶(CqEG)。通过对基因组DNA的1012bp PCR产物进行PCR扩增和测序,证实了该基因的内源起源。该片段包含四个与cDNA相同的外显子序列,并分别被三个371、102、194bp的内含子打断,其中一个内含子具有典型的真核剪接位点。从红螯螯虾中分离出编码内切-1,4-β-葡聚糖酶的cDNA,这是甲壳类物种中的第一个内源纤维素酶序列。

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