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酵母中无外源配体的高铁细胞色素c过氧化物酶活性位点血红素配位球的磁圆二色性研究:样品历史和pH值的影响

Magnetic circular dichroism studies of the active site heme coordination sphere of exogenous ligand-free ferric cytochrome c peroxidase from yeast: effects of sample history and pH.

作者信息

Pond A E, Sono M, Elenkova E A, McRee D E, Goodin D B, English A M, Dawson J H

机构信息

Department of Chemistry and Biochemistry, University of South Carolina, Columbia 29208, USA.

出版信息

J Inorg Biochem. 1999 Sep 30;76(3-4):165-74. doi: 10.1016/s0162-0134(99)00112-9.

Abstract

Electronic absorption and magnetic circular dichroism (MCD) spectroscopic data at 4 degrees C are reported for exogenous ligand-free ferric forms of cytochrome c peroxidase (CCP) in comparison with two other histidine-ligated heme proteins, horseradish peroxidase (HRP) and myoglobin (Mb). In particular, we have examined the ferric states of yeast wild-type CCP (YCCP), CCP (MKT) which is the form of the enzyme that is expressed in and purified from E. coli, and contains Met-Lys-Thr (MKT) at the N-terminus, CCP (MKT) in the presence of 60% glycerol, lyophilized YCCP, and alkaline CCP (MKT). The present study demonstrates that, while having similar electronic absorption spectra, the MCD spectra of ligand-free ferric YCCP and CCP (MKT) are somewhat varied from one another. Detailed spectral analyses reveal that the ferric form of YCCP, characterized by a long wavelength charge transfer (CT) band at 645 nm, exists in a predominantly penta-coordinate state with spectral features similar to those of native ferric HRP rather than ferric Mb (His/water hexa-coordinate). The electronic absorption spectrum of ferric CCP (MKT) is similar to those of the penta-coordinate states of ferric YCCP and ferric HRP including a CT band at 645 nm. However, its MCD spectrum shows a small trough at 583 nm that is absent in the analogous spectra of YCCP and HRP. Instead, this trough is similar to that seen for ferric myoglobin at about 585 nm, and is attributed (following spectral simulations) to a minor contribution (< or = 5%) in the spectrum of CCP (MKT) from a hexa-coordinate low-spin species in the form of a hydroxide-ligated heme. The MCD data indicate that the lyophilized sample of ferric YCCP (lambda CT = 637 nm) contains considerably increased amounts of hexa-coordinate low-spin species including both His/hydroxide and bis-His species. The crystal structure of a spectroscopically similar sample of CCP (MKT) (lambda CT = 637 nm) solved at 2.0 A resolution is consistent with His/hydroxide coordination. Alkaline CCP (pH 9.7) is proposed to exist as a mixture of hexa-coordinate, predominantly low-spin complexes with distal His 52 and hydroxide acting as distal ligands based on MCD spectral comparisons.

摘要

报道了4℃下细胞色素c过氧化物酶(CCP)的外源无配体铁形式的电子吸收和磁圆二色性(MCD)光谱数据,并与另外两种组氨酸连接的血红素蛋白辣根过氧化物酶(HRP)和肌红蛋白(Mb)进行了比较。具体而言,我们研究了酵母野生型CCP(YCCP)、CCP(MKT)(该酶在大肠杆菌中表达并纯化,N端含有甲硫氨酸-赖氨酸-苏氨酸(MKT))、60%甘油存在下的CCP(MKT)、冻干的YCCP以及碱性CCP(MKT)的铁状态。本研究表明,虽然无配体铁的YCCP和CCP(MKT)具有相似的电子吸收光谱,但其MCD光谱彼此略有不同。详细的光谱分析表明,YCCP的铁形式在645nm处有一个长波长电荷转移(CT)带,主要以五配位状态存在,其光谱特征与天然铁HRP相似,而非铁Mb(组氨酸/水六配位)。铁CCP(MKT)的电子吸收光谱与铁YCCP和铁HRP的五配位状态相似,包括645nm处的CT带。然而,其MCD光谱在583nm处有一个小低谷,这在YCCP和HRP的类似光谱中不存在。相反,这个低谷与铁肌红蛋白在约585nm处的低谷相似,并且(根据光谱模拟)归因于CCP(MKT)光谱中来自氢氧化物连接血红素形式的六配位低自旋物种的微小贡献(≤5%)。MCD数据表明,冻干的铁YCCP样品(λCT = 637nm)含有大量增加的六配位低自旋物种,包括组氨酸/氢氧化物和双组氨酸物种。以2.0埃分辨率解析的光谱相似的CCP(MKT)样品(λCT = 637nm)的晶体结构与组氨酸/氢氧化物配位一致。基于MCD光谱比较,碱性CCP(pH 9.7)被认为以六配位、主要是低自旋配合物的混合物形式存在,远端组氨酸52和氢氧化物作为远端配体。

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