Howes B D, Rodriguez-Lopez J N, Smith A T, Smulevich G
Dipartimento di Chimica, Università de Firenze, Italy.
Biochemistry. 1997 Feb 11;36(6):1532-43. doi: 10.1021/bi962502o.
The manner in which the distal heme pocket residues of peroxidases control the reaction mechanism and ligand binding has been investigated further by analysis of the electronic absorption and resonance Raman (RR) spectra of distal site mutants of recombinant horseradish peroxidase (HRP-C*). The roles of the conserved distal histidine and arginine residues, particularly in the context of the catalytic mechanism originally proposed for cytochrome c peroxidase (CCP), have been evaluated by studying the His42 --> Leu, His42 --> Arg, Arg38 --> Gly, and Arg38 --> Leu variants of HRP-C*. Spectra of the ferric forms, their complexes with benzohydroxamic acid (BHA), and the ferrous forms have been recorded at neutral pH. In addition, the ferric forms have been studied at alkaline pH. The relative populations of the three heme spin states characteristic of HRP-C* and its mutants were found to vary markedly from mutant to mutant. This diversity of heme spin state populations among the various mutants has allowed a well-defined set of RR frequencies to be compiled for the three heme spin states. These frequencies support the analysis of wild-type HRP-C* in terms of two heme states, five- (5cHS#) and six-coordinate high-spin (6cHS#), which exhibit anomalous RR frequencies compared to those of model heme systems. The third heme spin state is identified as being six-coordinate high-spin, displaying typical RR frequencies (6cHS). The 6cHS# and the 6cHS heme states are characterized by H bonding between the iron-bound water molecule and the Arg38 residue or the His42 residue, respectively. The proportion of six-coordinate high-spin heme states is at a minimum in the Arg38Leu mutant, indicating that the occupancy of the distal water molecule site is reduced in this mutant. The His42Arg mutant is distinguished from the other mutants by the unexpected presence of an iron-bound hydroxyl group at neutral pH. The spectral changes induced upon complexation with BHA indicate that both the distal histidine and arginine are involved in BHA binding; however, the arginine residue appears to play a more critical role. Measurements at pH 12 suggest there is a concerted involvement of both distal residues in mediating the alkaline transition of HRP-C*. Arg38 appears to be essential for stabilization of the OH- ligand, while His42 acts as a H bond acceptor. A striking similarity between the roles of these residues in the reaction of H2O2 with the enzyme and the alkaline transition is noted. By comparison with the results from corresponding mutants of CCP, it appears that although the hydrogen-bonding network linking the distal and proximal sides of the heme is conserved the distal cavity in HRP-C differs significantly from that of CCP. However, some similarities in the local environment of the distal arginine are suggested.
通过对重组辣根过氧化物酶(HRP-C*)远端位点突变体的电子吸收光谱和共振拉曼(RR)光谱进行分析,进一步研究了过氧化物酶远端血红素口袋残基控制反应机制和配体结合的方式。通过研究HRP-C的His42→Leu、His42→Arg、Arg38→Gly和Arg38→Leu变体,评估了保守的远端组氨酸和精氨酸残基的作用,特别是在最初为细胞色素c过氧化物酶(CCP)提出的催化机制背景下的作用。在中性pH下记录了铁离子形式、它们与苯甲羟肟酸(BHA)的复合物以及亚铁离子形式的光谱。此外,还研究了碱性pH下的铁离子形式。发现HRP-C及其突变体特有的三种血红素自旋态的相对丰度在不同突变体之间有显著差异。各种突变体之间血红素自旋态丰度的这种多样性使得能够为三种血红素自旋态编制一组明确的RR频率。这些频率支持将野生型HRP-C分析为两种血红素状态,即五配位高自旋(5cHS#)和六配位高自旋(6cHS#),与模型血红素系统相比,它们表现出异常的RR频率。第三种血红素自旋态被确定为六配位高自旋,显示出典型的RR频率(6cHS)。6cHS#和6cHS血红素状态的特征分别是铁结合水分子与Arg38残基或His42残基之间的氢键。在Arg38Leu突变体中,六配位高自旋血红素状态的比例最小,表明该突变体中远端水分子位点的占有率降低。His42Arg突变体与其他突变体的区别在于,在中性pH下意外出现了铁结合的羟基。与BHA络合时诱导的光谱变化表明,远端组氨酸和精氨酸都参与了BHA的结合;然而,精氨酸残基似乎起着更关键的作用。在pH 12下的测量表明,两个远端残基在介导HRP-C的碱性转变中协同参与。Arg38似乎对OH-配体的稳定至关重要,而His42作为氢键受体。注意到这些残基在H2O2与酶的反应和碱性转变中的作用之间存在惊人的相似性。与CCP相应突变体的结果相比,似乎尽管连接血红素远端和近端的氢键网络是保守的,但HRP-C中的远端腔与CCP的有显著差异。然而,有人提出远端精氨酸的局部环境存在一些相似之处。