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来自普通小麦和拟南芥的腺苷酸琥珀酸合成酶的结构。

Structures of adenylosuccinate synthetase from Triticum aestivum and Arabidopsis thaliana.

作者信息

Prade L, Cowan-Jacob S W, Chemla P, Potter S, Ward E, Fonne-Pfister R

机构信息

Novartis Pharma AG, Basel, CH-4056, Switzerland.

出版信息

J Mol Biol. 2000 Feb 18;296(2):569-77. doi: 10.1006/jmbi.1999.3473.

Abstract

Catalyzing the first step in the de novo synthesis of adenylmonophosphate, adenylosuccinate synthetase (AdSS) is a known target for herbicides and antibiotics. We have purified and crystallized recombinant AdSS from Arabidopsis thaliana and Tritium aestivum, expressed in Escherichia coli. The structures of A. thaliana and T. aestivum AdSS in complex with GDP were solved at 2.9 A and 3.0 A resolution, respectively. Comparison with the known structures from E. coli reveals that the overall fold is very similar to that of the E. coli protein. The longer N terminus in the plant sequences is at the same place as the longer C terminus of the E. coli sequence in the 3D structure. The GDP-binding sites have one additional hydrogen-bonding partner, which is a plausible explanation for the lower K(m) value. Due to its special position, this partner may also enable GTP to initiate a conformational change, which was, in E. coli AdSS, exclusively activated by ligands at the IMP-binding site. The dimer interfaces show up to six hydrogen bonds and six salt-bridges more than in the E. coli structure, although the contact areas have approximately the same size.

摘要

腺苷酸琥珀酸合成酶(AdSS)催化单磷酸腺苷从头合成的第一步,是已知的除草剂和抗生素作用靶点。我们从在大肠杆菌中表达的拟南芥和普通小麦中纯化并结晶了重组AdSS。拟南芥和普通小麦AdSS与GDP复合物的结构分别以2.9 Å和3.0 Å的分辨率解析。与大肠杆菌已知结构的比较表明,整体折叠与大肠杆菌蛋白非常相似。植物序列中较长的N端在三维结构中与大肠杆菌序列较长的C端处于相同位置。GDP结合位点有一个额外的氢键伙伴,这可能是K(m)值较低的一个合理原因。由于其特殊位置,这个伙伴也可能使GTP引发构象变化,而在大肠杆菌AdSS中,这种变化仅由IMP结合位点的配体激活。二聚体界面显示出比大肠杆菌结构多多达六个氢键和六个盐桥,尽管接触面积大小大致相同。

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