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在多重逆转录聚合酶链反应中使用寡聚(dT)作为通用cDNA引物检测多种马铃薯病毒

Detection of multiple potato viruses using an oligo(dT) as a common cDNA primer in multiplex RT-PCR.

作者信息

Nie X, Singh R P

机构信息

Agriculture and Agri-Food Canada, Potato Research Centre, PO Box 20280, Fredericton, New Brunswick, Canada.

出版信息

J Virol Methods. 2000 May;86(2):179-85. doi: 10.1016/s0166-0934(00)00140-3.

DOI:10.1016/s0166-0934(00)00140-3
PMID:10785293
Abstract

A novel usage of multiplex reverse transcription polymerase chain reaction (m-RT-PCR) for simultaneous detection of multiple viruses is reported. By use of an oligo(dT), as a common primer, nearly full-length cDNAs can be synthesized. Furthermore, combining an oligo(dT) primer with a specific antisense primer can be used to simultaneously prime reverse transcription of both polyadenylated and non-polyadenylated RNAs. Four viral genera including five potato viruses [(carlavirus (PVS), polerovirus (PLRV), potexvirus (PVX), potyvirus (PVA and PVY))] and a viroid genus including a viroid genome (pospiviroid (PSTVd)) were used to develop various formats of m-RT-PCR. In artificially created viral RNA mixtures, all six RNA pathogens were detected successfully by uniplex- and m-RT-PCR. In naturally infected field grown tubers, m-RT-PCR detected infection of two to three viruses, which were present in the tubers.

摘要

报道了多重逆转录聚合酶链反应(m-RT-PCR)用于同时检测多种病毒的新用途。通过使用寡聚(dT)作为通用引物,可以合成几乎全长的cDNA。此外,将寡聚(dT)引物与特异性反义引物结合,可用于同时引发聚腺苷酸化和非聚腺苷酸化RNA的逆转录。使用包括五种马铃薯病毒的四个病毒属[(香石竹潜隐病毒(PVS)、马铃薯卷叶病毒(PLRV)、马铃薯X病毒(PVX)、马铃薯Y病毒(PVA和PVY))]和包括一种类病毒基因组的一个类病毒属[马铃薯纺锤块茎类病毒(PSTVd)]来开发各种形式的m-RT-PCR。在人工构建的病毒RNA混合物中,通过单重和m-RT-PCR成功检测到所有六种RNA病原体。在自然感染的田间种植块茎中,m-RT-PCR检测到块茎中存在的两到三种病毒感染。

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