• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

肽复合物中四苯基卟啉的振动圆二色性?一项计算研究。

Vibrational circular dichroism of tetraphenylporphyrin in peptide complexes? A computational study.

作者信息

Bour P, Záruba K, Urbanová M, Setnicka V, Matejka P, Fiedler Z, Král V, Volka K

机构信息

Department of Analytical Chemistry, Institute of Chemical Technology, Prague, Czech Republic.

出版信息

Chirality. 2000 May;12(4):191-8. doi: 10.1002/(SICI)1520-636X(2000)12:4<191::AID-CHIR5>3.0.CO;2-W.

DOI:10.1002/(SICI)1520-636X(2000)12:4<191::AID-CHIR5>3.0.CO;2-W
PMID:10790189
Abstract

The Raman and absorption spectra of tetraphenylporphyrin (TPP) were calculated and compared to experiment. The computation was based on the harmonic molecular force field and electric tensors obtained ab initio at the BPW91/6-31G* level. Good agreement was found between experimental and calculated frequencies and intensities. In order to estimate whether induced optical activity in chiral complexes interferes with the signal of peptide vibrations, the vibrational circular dichroism (VCD) spectra of TPP were simulated. The magnetic field perturbation theory (MFP) and the gauge-invariant atomic orbitals (GIAO) were used for the simulation. Such spectra were compared to theoretical VCD intensities of a model tripeptide as well to experimental spectra of a complex of the peptide and tetrakis(p-sulfonatophenyl)porphyrin (TSPP). No significant contribution to VCD signal from the TPP residue was found in experimental spectra. Thus, possible peptide conformational changes occurring during the complexation can be monitored directly in the amide I frequency region.

摘要

计算了四苯基卟啉(TPP)的拉曼光谱和吸收光谱,并与实验结果进行了比较。计算基于在BPW91/6 - 31G*水平从头算得到的分子简正力场和电张量。实验频率和强度与计算结果之间吻合良好。为了评估手性配合物中的诱导光学活性是否会干扰肽振动信号,模拟了TPP的振动圆二色性(VCD)光谱。模拟采用了磁场微扰理论(MFP)和规范不变原子轨道(GIAO)。将此类光谱与模型三肽的理论VCD强度以及该肽与四(对磺酸钠苯基)卟啉(TSPP)配合物的实验光谱进行了比较。在实验光谱中未发现TPP残基对VCD信号有显著贡献。因此,在配合过程中可能发生的肽构象变化可以直接在酰胺I频率区域进行监测。

相似文献

1
Vibrational circular dichroism of tetraphenylporphyrin in peptide complexes? A computational study.肽复合物中四苯基卟啉的振动圆二色性?一项计算研究。
Chirality. 2000 May;12(4):191-8. doi: 10.1002/(SICI)1520-636X(2000)12:4<191::AID-CHIR5>3.0.CO;2-W.
2
Direct calculations of vibrational absorption and circular dichroism spectra of alanine dipeptide analog in water: quantum mechanical/molecular mechanical molecular dynamics simulations.水中丙氨酸二肽类似物振动吸收和圆二色光谱的直接计算:量子力学/分子力学分子动力学模拟
J Chem Phys. 2009 Oct 7;131(13):135102. doi: 10.1063/1.3243078.
3
Simulations of oligopeptide vibrational CD: effects of isotopic labeling.寡肽振动圆二色性的模拟:同位素标记的影响
Biopolymers. 2000 Apr 15;53(5):380-95. doi: 10.1002/(SICI)1097-0282(20000415)53:5<380::AID-BIP3>3.0.CO;2-R.
4
Noncovalent interactions of peptides with porphyrins in aqueous solution: conformational study using vibrational CD spectroscopy.肽与卟啉在水溶液中的非共价相互作用:利用振动圆二色光谱进行的构象研究。
Biopolymers. 2001;60(4):307-16. doi: 10.1002/1097-0282(2001)60:4<307::AID-BIP9992>3.0.CO;2-1.
5
Spectroscopic properties of the nonplanar amide group: a computational study.非平面酰胺基团的光谱性质:一项计算研究。
Chirality. 2007 Nov;19(10):775-86. doi: 10.1002/chir.20462.
6
Solvent effects on IR and VCD spectra of helical peptides: DFT-based static spectral simulations with explicit water.溶剂对螺旋肽红外光谱和振动圆二色光谱的影响:基于密度泛函理论的含显式水的静态光谱模拟
J Phys Chem B. 2005 Apr 28;109(16):8231-43. doi: 10.1021/jp0506078.
7
Vibrational circular dichroism and IR spectral analysis as a test of theoretical conformational modeling for a cyclic hexapeptide.振动圆二色性和红外光谱分析作为一种对环六肽理论构象建模的检验
Chirality. 2008 Nov;20(10):1104-19. doi: 10.1002/chir.20560.
8
Vibrational spectral simulation for peptides of mixed secondary structure: method comparisons with the Trpzip model hairpin.混合二级结构肽的振动光谱模拟:与Trpzip模型发夹的方法比较
J Phys Chem B. 2005 Dec 15;109(49):23687-97. doi: 10.1021/jp054107q.
9
Lactic acid in solution: investigations of lactic acid self-aggregation and hydrogen bonding interactions with water and methanol using vibrational absorption and vibrational circular dichroism spectroscopies.溶液中的乳酸:利用振动吸收光谱和振动圆二色光谱研究乳酸的自聚集以及与水和甲醇的氢键相互作用
J Chem Phys. 2008 Jan 7;128(1):014508. doi: 10.1063/1.2806192.
10
FTIR, FT-Raman spectra and ab initio DFT vibrational analysis of 2,4-dichloro-6-nitrophenol.2,4-二氯-6-硝基苯酚的傅里叶变换红外光谱、傅里叶变换拉曼光谱及从头算密度泛函理论振动分析
Spectrochim Acta A Mol Biomol Spectrosc. 2006 Dec;65(5):1053-62. doi: 10.1016/j.saa.2006.01.041. Epub 2006 May 23.

引用本文的文献

1
Vibration and Fluorescence Spectra of Porphyrin-Cored 2,2-Bis(methylol)-propionic Acid Dendrimers.卟啉核 2,2-双(羟甲基)-丙酸树枝状大分子的振动和荧光光谱。
Sensors (Basel). 2009;9(3):1937-66. doi: 10.3390/s90301937. Epub 2009 Mar 16.