Naberezhnykh G A, Kim N Y, Glazunov V P, Bakholdina S I, Krasikova I N, Khomenko V A, Solov'eva T F
Pacific Institute of Bioorganic Chemistry, Far East Branch of the Russian Academy of Sciences, Vladivostok, 690022, Russia.
Biochemistry (Mosc). 2000 Apr;65(4):485-93.
Interaction of the pore-forming protein (porin) from Yersinia pseudotuberculosis with S- and R-forms of the endogenous lipopolysaccharide (LPS) was studied at various ionic strengths (20-600 mM NaCl), concentrations of divalent cations (5-100 mM CaCl2, MgCl2), and pH values from 3.0 to 9.0. The interaction of the R-LPS with porin has been shown in all experimental conditions to be in consensus with the model suggesting binding at independent sites of two types. S-LPS binds to interacting sites of relatively high affinity and to independent sites of low affinity at all pH values examined and at low NaCl concentration. The cooperative interaction of the S-LPS and porin is not observed at high ionic strength and in divalent cation-free medium. The number of binding sites of porin and association constants (Ka) for both LPS forms decrease significantly on increasing the solution ionic strength. The Ka values for the R- and S-LPS change oppositely on changing the pH: the Ka value for the R-LPS is maximal (Ka = 6.7 x 10(5) M-1), but that for S-LPS is minimal (Ka = 0.4 x 10(5) M(-1) at pH 5.0-5.5. The number of high-affinity and low-affinity binding sites for both LPS forms is maximal at pH 5.0-5.5. In this case, the numbers of high- and low-affinity sites for R-LPS are 3 and 10, respectively, and those for the S-LPS are 7 and 20, respectively. These data suggest an important role of electrostatic interactions on binding of LPS to porin. The contribution of conformational changes of the ligand and protein and hydrophobic interactions are discussed.
研究了来自假结核耶尔森菌的成孔蛋白(孔蛋白)与内源性脂多糖(LPS)的S型和R型在不同离子强度(20 - 600 mM NaCl)、二价阳离子浓度(5 - 100 mM CaCl2、MgCl2)以及pH值为3.0至9.0条件下的相互作用。在所有实验条件下,R - LPS与孔蛋白的相互作用均符合在两种类型独立位点结合的模型。在所研究的所有pH值和低NaCl浓度下,S - LPS与相对高亲和力的相互作用位点以及低亲和力的独立位点结合。在高离子强度和无二价阳离子的介质中未观察到S - LPS与孔蛋白的协同相互作用。随着溶液离子强度的增加,两种LPS形式的孔蛋白结合位点数量和缔合常数(Ka)均显著降低。改变pH时,R - LPS和S - LPS的Ka值变化相反:R - LPS的Ka值最大(Ka = 6.7×10⁵ M⁻¹),而S - LPS的Ka值最小(在pH 5.0 - 5.5时,Ka = 0.4×10⁵ M⁻¹)。两种LPS形式的高亲和力和低亲和力结合位点数量在pH 5.0 - 5.5时最大。在这种情况下,R - LPS的高亲和力和低亲和力位点数量分别为3和10,S - LPS的分别为7和20。这些数据表明静电相互作用在LPS与孔蛋白结合中起重要作用。还讨论了配体和蛋白质构象变化以及疏水相互作用的贡献。