Vakorina T I, Novikova O D, Krasikova I N, Naberezhnykh G N, Solov'eva T F, Ovodov Yu S
Pacific Institute of Bioorganic Chemistry, Far East Branch of the Russian Academy of Sciences, Vladivostok 690022, Russia.
Biochemistry (Mosc). 2003 Sep;68(9):976-83. doi: 10.1023/a:1026056411472.
The interaction of Yersinia pseudotuberculosis porin solubilized in deoxycholate with the S- and R-forms of endogenous lipopolysaccharide (LPS) was studied by the quenching of intrinsic protein fluorescence. The samples of S-LPS differed both in the length of O-specific polysaccharide (n = 1 and 4) and in the acylation degree of the 3-hydroxytetradecanoic acid residues of the lipid A moiety (12-66%). R-LPS (12%) binding to porin was found to occur with positive cooperativity on two integrated structural regions of the R-LPS macromolecule, namely, core oligosaccharide and lipid A. The mode of porin interaction with low-acylated S-LPSs (15 or 20%) coincided with a model involving three types of binding sites. The shape of Scatchard curves of binding indicates that a complex formation between porin and low-acylated S-LPS is cooperative at low and moderate ligand concentration, whereas at near-saturating LPS concentrations porin binds to LPS independently on two types of binding sites. The O-specific polysaccharide chain in the S-LPS macromolecule increases the affinity of its interaction with porin in comparison with R-LPS-porin binding. A significant increase (to 66%) in the degree of S-LPS acylation substantially changed its porin-binding character: the process became anti-cooperative with lowered affinity. Thus, the features of LPS-porin interaction significantly depend on the conformational changes in the LPS molecule due to expanding of its hydrophobic region.
通过内源性蛋白质荧光猝灭研究了溶解在脱氧胆酸盐中的假结核耶尔森氏菌孔蛋白与内源性脂多糖(LPS)的S型和R型的相互作用。S-LPS样品在O-特异性多糖的长度(n = 1和4)以及脂多糖A部分的3-羟基十四烷酸残基的酰化程度(12-66%)方面均有所不同。发现R-LPS(12%)与孔蛋白的结合在R-LPS大分子的两个整合结构区域,即核心寡糖和脂多糖A上呈现正协同性。孔蛋白与低酰化S-LPS(15%或20%)的相互作用模式与涉及三种结合位点的模型一致。结合的Scatchard曲线形状表明,在低和中等配体浓度下,孔蛋白与低酰化S-LPS之间的复合物形成是协同的,而在接近饱和的LPS浓度下,孔蛋白在两种结合位点上独立地与LPS结合。与R-LPS-孔蛋白结合相比,S-LPS大分子中的O-特异性多糖链增加了其与孔蛋白相互作用的亲和力。S-LPS酰化程度显著增加(至66%)极大地改变了其与孔蛋白的结合特性:该过程变得反协同且亲和力降低。因此,LPS-孔蛋白相互作用的特征显著取决于LPS分子由于其疏水区域扩展而发生的构象变化。