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一种用于快速体外基因表达的经过修饰的病毒非帽依赖性翻译增强序列。

A trimmed viral cap-independent translation enhancing sequence for rapid in vitro gene expression.

作者信息

Kawarasaki Y, Kasahara S, Kodera N, Shinbata T, Sekiguchi S, Nakano H, Yamane T

机构信息

Laboratory of Molecular Biotechnology, Division of Molecular and Cell Mechanisms, Department of Biological Mechanisms and Functions, Graduate School of Bio- and Agro-Sciences, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8601, Japan.

出版信息

Biotechnol Prog. 2000 May-Jun;16(3):517-21. doi: 10.1021/bp000021x.

DOI:10.1021/bp000021x
PMID:10835258
Abstract

We prepared a short (29 nucleotides) 5' UTR that enhanced cap-independent translation in a wheat germ translation system by trimming the tobacco etch virus 5' UTR. The trimmed sequence, designated as TE(37-65), was obtained from a conserved region among several potyviruses. The productivities of uncapped reporter mRNAs carrying the TE(37-65) sequence were comparable to those of capped counterparts, in that 5-20 microg of proteins were synthesized per 1 mL of translation reaction mixture. The ribosome that entered onto the TE(37-65) sequence precisely initiated polypeptide synthesis at the defined initiation codon, which ensures rapid and efficient protein truncation analyses. Moreover, the TE(37-65) sequence is short enough to be involved in a PCR primer, which allows a simple method for rapid gene expression, i.e., PCR amplification of a target gene and succeeding in vitro transcription and translation. As a demonstration, the rapid in vitro expression of rice cDNAs using the TE(37-65) sequence was also performed.

摘要

我们制备了一段短的(29个核苷酸)5'非翻译区(UTR),通过对烟草蚀纹病毒5'UTR进行修剪,该序列在小麦胚芽翻译系统中增强了不依赖帽子结构的翻译。修剪后的序列命名为TE(37 - 65),它取自几种马铃薯Y病毒属病毒的保守区域。携带TE(37 - 65)序列的无帽报告mRNA的翻译效率与有帽的对应物相当,即每1 mL翻译反应混合物可合成5 - 20微克蛋白质。进入TE(37 - 65)序列的核糖体在确定的起始密码子处精确起始多肽合成,这确保了快速且高效的蛋白质截短分析。此外,TE(37 - 65)序列足够短,可以包含在PCR引物中,这提供了一种用于快速基因表达的简单方法,即对目标基因进行PCR扩增,随后进行体外转录和翻译。作为示例,还利用TE(37 - 65)序列对水稻cDNA进行了快速体外表达。

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Virus Res. 2006 Jul;119(1):63-75. doi: 10.1016/j.virusres.2005.10.010. Epub 2005 Dec 19.