Kibar Z, Dubé M P, Powell J, McCuaïg C, Hayflick S J, Zonana J, Hovnanian A, Radhakrishna U, Antonarakis S E, Benohanian A, Sheeran A D, Stephan M L, Gosselin R, Kelsell D P, Christianson A L, Fraser F C, Der Kaloustian V M, Rouleau G A
Center for Research in Neurosciences, Montreal General Hospital Research Institute, Québec, Canada.
Eur J Hum Genet. 2000 May;8(5):372-80. doi: 10.1038/sj.ejhg.5200471.
HED is an autosomal dominant skin disorder that is particularly common in the French Canadian population of south-west Quebec. We previously mapped the HED gene to the pericentromeric region of chromosome 13q using linkage analysis in eight French Canadian families. In this study, we extend our genetic analysis to include a multiethnic group of 29 families with 10 polymorphic markers spanning 5.1 cM in the candidate region. Two-point linkage analysis strongly suggests absence of genetic heterogeneity in HED in four families of French, Spanish, African and Malaysian origins. Multipoint linkage analysis in all 29 families generated a peak lod score of 53.5 at D13S1835 with a 1 lod unit support interval spanning 1.8 cM. Recombination mapping placed the HED gene in a 2.4 cM region flanked by D13S1828 proximally and D13S1830 distally. We next show evidence for a strong founder effect in families of French Canadian origin thereby representing the first example of a founder disease in the south-west part of the province of Quebec. Significant association was found between HED in these families and all markers analysed (Fisher's exact test, P < 0.001). Complete allelic association was detected at D13S1828, D13S1827, D13S1835, D13S141 and D13S175 (P(excess) = 1) spanning 1.3 cM. A major haplotype including all 10 associated alleles was present on 65% of affected chromosomes. This haplotype most likely represents the founder haplotype that introduced the HED mutation into the French Canadian population. Luria-Delbrück equations and multipoint likelihood linkage disequilibrium analysis positioned the gene at the D13S1828 locus (likely range estimate: 1.75 cM) and 0.58 cM telomeric to this marker (support interval: 3.27 cM) respectively.
遗传性外胚层发育不良(HED)是一种常染色体显性皮肤疾病,在魁北克西南部的法裔加拿大人中尤为常见。我们之前通过对八个法裔加拿大家庭进行连锁分析,将HED基因定位到13号染色体长臂的着丝粒周围区域。在本研究中,我们扩展了基因分析范围,纳入了一个多民族的29个家庭组成的群体,在候选区域使用了10个多态性标记,跨度为5.1厘摩(cM)。两点连锁分析强烈表明,在法裔、西班牙裔、非洲裔和马来西亚裔的四个家庭中,HED不存在遗传异质性。对所有29个家庭进行的多点连锁分析在D13S1835处产生了53.5的最高对数优势分数(lod score),其1个lod单位支持区间跨度为1.8 cM。重组图谱将HED基因定位在一个2.4 cM的区域内,近端以D13S1828为界,远端以D13S1830为界。接下来,我们展示了法裔加拿大家庭中存在强烈奠基者效应的证据,这是魁北克省西南部首个奠基者疾病的例子。在这些家庭中的HED与所有分析的标记之间发现了显著关联(Fisher精确检验,P < 0.001)。在D13S1828、D13S1827、D13S1835、D13S141和D13S175处检测到完全等位基因关联(P(过剩) = 1),跨度为1.3 cM。在65%的受影响染色体上存在一个包含所有10个相关等位基因的主要单倍型。这个单倍型很可能代表了将HED突变引入法裔加拿大人群体的奠基者单倍型。鲁里亚 - 德尔布吕克方程和多点似然连锁不平衡分析分别将该基因定位在D13S(可能范围估计:1.75 cM)以及该标记端粒方向0.58 cM处(支持区间:3.27 cM)。