Shim H, Raushel F M
Department of Chemistry, Texas A&M University, College Station 77843, USA.
Biochemistry. 2000 Jun 27;39(25):7357-64. doi: 10.1021/bi000291o.
The active site of the bacterial phosphotriesterase (PTE) from Pseudomonas diminuta contains two divalent metal ions and a carboxylated lysine residue. The native enzyme contains two Zn(2+) ions, which can be replaced with Co(2+), Cd(2+), Ni(2+), or Mn(2+) without loss of catalytic activity. Carbon dioxide reacts with the side chain of lysine-169 to form a carbamate functional group within the active site, which then serves as a bridging ligand to the two metal ions. The activation of apo-PTE using variable concentrations of divalent metal ions and bicarbonate was measured in order to establish the mechanism by which the active site of PTE is self-assembled. The time courses for the activation of apo-PTE are pseudo-first-order, and the observed rate constants are directly proportional to the concentration of bicarbonate. In contrast, the apparent rate constants for the activation of apo-PTE decrease as the concentrations of the divalent cations are increased and then become constant at higher concentrations of the divalent metal ions. These results are consistent with a largely ordered kinetic mechanism for the assembly of the binuclear metal center where CO(2)/bicarbonate reacts with the apo-PTE prior to the binding of the two metal ions. When apo-PTE is titrated with 0-8 equiv of Co(2+), Cd(2+), or Zn(2+), the concentration of activated enzyme increases linearly until 2 equiv of metal ion is added and then remains constant at elevated levels of the divalent cations. These results are consistent with the synergistic binding of the two metal ions to the active site, and thus the second metal ion binds more tightly to the protein than does the first metal ion. Measurement of the mean dissociation constant indicates that metal binding to the binuclear metal center is strong [(K(alpha)K(beta))(1/2) = 6.0 x 10(-)(11) M and k(off) = 1.5 x 10(-)(3) min(-)(1) for Zn(2+)]. The removal of the carbamate bridge through the mutagenesis of Lys-169 demonstrates that the carbamate bridge is required for both efficient catalysis and overall stability of the metal center.
来自微小假单胞菌的细菌磷酸三酯酶(PTE)的活性位点包含两个二价金属离子和一个羧化赖氨酸残基。天然酶含有两个Zn(2+)离子,可用Co(2+)、Cd(2+)、Ni(2+)或Mn(2+)替代,而不会丧失催化活性。二氧化碳与赖氨酸-169的侧链反应,在活性位点内形成一个氨基甲酸酯官能团,然后该官能团作为两个金属离子的桥连配体。使用不同浓度的二价金属离子和碳酸氢盐对脱辅基PTE进行活化测定,以确定PTE活性位点的自组装机制。脱辅基PTE活化的时间进程为假一级反应,观察到的速率常数与碳酸氢盐浓度成正比。相反,随着二价阳离子浓度增加,脱辅基PTE活化的表观速率常数降低,然后在二价金属离子浓度较高时保持恒定。这些结果与双核金属中心组装的主要有序动力学机制一致,即CO(2)/碳酸氢盐在两个金属离子结合之前与脱辅基PTE反应。当用0 - 8当量的Co(2+)、Cd(2+)或Zn(2+)滴定脱辅基PTE时,活化酶的浓度线性增加,直到加入2当量的金属离子,然后在二价阳离子浓度升高时保持恒定。这些结果与两个金属离子协同结合到活性位点一致,因此第二个金属离子比第一个金属离子更紧密地结合到蛋白质上。平均解离常数的测定表明,金属与双核金属中心的结合很强[对于Zn(2+),(K(α)K(β))(1/2)=6.0×10(-11) M,k(off)=1.5×10(-3) min(-1)]。通过赖氨酸-169的诱变去除氨基甲酸酯桥表明,氨基甲酸酯桥对于金属中心的有效催化和整体稳定性都是必需的。