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人类L1逆转座:从培养细胞逆转座试验中学到的见解和特性。

Human L1 retrotransposition: insights and peculiarities learned from a cultured cell retrotransposition assay.

作者信息

Moran J V

机构信息

Department of Human Genetics and Internal Medicine, The University of Michigan Medical School, Ann Arbor 48109-0618, USA.

出版信息

Genetica. 1999;107(1-3):39-51.

PMID:10952196
Abstract

Long Interspersed Nuclear Elements (L1s or LINEs) are the most abundant retrotransposons in the human genome, and they comprise approximately 17% of DNA. L1 retrotransposition can be mutagenic, and deleterious insertions both in the germ-line and in somatic cells have resulted in disease. Recently, an assay was developed to monitor L1 retrotransposition in cultured human cells. This assay, for the first time, now allows for a systematic study of L1 retrotransposition at the molecular level. Here, I will review progress made in L1 biology during the past three years. In general, I will limit the discussion to studies conducted on human L1s. However, interesting parallels to rodent L1s and other non-LTR retrotransposons also will be discussed.

摘要

长散在核元件(L1或LINEs)是人类基因组中最丰富的逆转录转座子,约占DNA的17%。L1逆转录转座具有致突变性,其在生殖细胞和体细胞中的有害插入均已导致疾病。最近,一种用于监测培养的人类细胞中L1逆转录转座的检测方法被开发出来。该检测方法首次使得在分子水平上对L1逆转录转座进行系统研究成为可能。在此,我将回顾过去三年中L1生物学领域取得的进展。总体而言,我将把讨论限定在对人类L1进行的研究上。不过,也会讨论与啮齿动物L1及其他非LTR逆转录转座子有趣的相似之处。

相似文献

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Human L1 retrotransposition: insights and peculiarities learned from a cultured cell retrotransposition assay.人类L1逆转座:从培养细胞逆转座试验中学到的见解和特性。
Genetica. 1999;107(1-3):39-51.
2
LINE-1 retrotransposition in human neuroblastoma cells is affected by oxidative stress.人类神经母细胞瘤细胞中的 LINE-1 反转录转座受氧化应激影响。
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L1 retrotransposition is suppressed by endogenously encoded small interfering RNAs in human cultured cells.在人类培养细胞中,L1逆转座受到内源性编码的小干扰RNA的抑制。
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Hot L1s account for the bulk of retrotransposition in the human population.热L1元件占人类群体中逆转座的大部分。
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A mouse model of human L1 retrotransposition.人类L1逆转录转座的小鼠模型。
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L1 retrotransposition can occur early in human embryonic development.L1逆转座可发生在人类胚胎发育的早期。
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LINE-1 Retrotransposition Assays in Embryonic Stem Cells.胚胎干细胞中的LINE-1逆转座分析
Methods Mol Biol. 2023;2607:257-309. doi: 10.1007/978-1-0716-2883-6_13.
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Long-read assembly of a Great Dane genome highlights the contribution of GC-rich sequence and mobile elements to canine genomes.对一只大丹犬基因组进行长读长组装,突出了 GC 丰富序列和转座元件对犬类基因组的贡献。
Proc Natl Acad Sci U S A. 2021 Mar 16;118(11). doi: 10.1073/pnas.2016274118.
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Frequency and methylation status of selected retrotransposition competent L1 loci in amyotrophic lateral sclerosis.
肌萎缩侧索硬化症中选定的逆转座子 L1 基因座的频率和甲基化状态。
Mol Brain. 2020 Nov 13;13(1):154. doi: 10.1186/s13041-020-00694-2.
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Dynamic Methylation of an L1 Transduction Family during Reprogramming and Neurodifferentiation.在重编程和神经分化过程中 L1 转导家族的动态甲基化。
Mol Cell Biol. 2019 Mar 19;39(7). doi: 10.1128/MCB.00499-18. Print 2019 Apr 1.
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Condensin II and GAIT complexes cooperate to restrict LINE-1 retrotransposition in epithelial cells.凝缩蛋白II和GAIT复合物协同作用以限制上皮细胞中的LINE-1逆转录转座。
PLoS Genet. 2017 Oct 13;13(10):e1007051. doi: 10.1371/journal.pgen.1007051. eCollection 2017 Oct.
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Natural Variation in the Distribution and Abundance of Transposable Elements Across the Caenorhabditis elegans Species.秀丽隐杆线虫物种中转座元件分布和丰度的自然变异
Mol Biol Evol. 2017 Sep 1;34(9):2187-2202. doi: 10.1093/molbev/msx155.
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L1Base 2: more retrotransposition-active LINE-1s, more mammalian genomes.L1Base 2:更多具有反转录转座活性的LINE-1,更多哺乳动物基因组。
Nucleic Acids Res. 2017 Jan 4;45(D1):D68-D73. doi: 10.1093/nar/gkw925. Epub 2016 Oct 18.
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Roles for retrotransposon insertions in human disease.逆转录转座子插入在人类疾病中的作用。
Mob DNA. 2016 May 6;7:9. doi: 10.1186/s13100-016-0065-9. eCollection 2016.
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LINE-1 Cultured Cell Retrotransposition Assay.LINE-1培养细胞逆转座分析
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The Influence of LINE-1 and SINE Retrotransposons on Mammalian Genomes.LINE-1 和 SINE 反转录转座子对哺乳动物基因组的影响。
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