Kunkel T A, Bebenek K
Laboratory of Molecular Genetics and Laboratory of Structural Biology, National Institute of Environmental Health Sciences, Research Triangle Park, North Carolina 27709, USA.
Annu Rev Biochem. 2000;69:497-529. doi: 10.1146/annurev.biochem.69.1.497.
DNA replication fidelity is a key determinant of genome stability and is central to the evolution of species and to the origins of human diseases. Here we review our current understanding of replication fidelity, with emphasis on structural and biochemical studies of DNA polymerases that provide new insights into the importance of hydrogen bonding, base pair geometry, and substrate-induced conformational changes to fidelity. These studies also reveal polymerase interactions with the DNA minor groove at and upstream of the active site that influence nucleotide selectivity, the efficiency of exonucleolytic proofreading, and the rate of forming errors via strand misalignments. We highlight common features that are relevant to the fidelity of any DNA synthesis reaction, and consider why fidelity varies depending on the enzymes, the error, and the local sequence environment.
DNA复制保真度是基因组稳定性的关键决定因素,对于物种进化和人类疾病的起源至关重要。在此,我们综述了目前对复制保真度的理解,重点关注DNA聚合酶的结构和生化研究,这些研究为氢键、碱基对几何形状以及底物诱导的构象变化对保真度的重要性提供了新见解。这些研究还揭示了聚合酶与活性位点及其上游DNA小沟的相互作用,这种相互作用会影响核苷酸选择性、核酸外切校对效率以及通过链错配形成错误的速率。我们强调了与任何DNA合成反应保真度相关的共同特征,并思考了为什么保真度会因酶、错误类型和局部序列环境的不同而有所变化。