Renner C, Behrendt R, Spörlein S, Wachtveitl J, Moroder L
Max-Planck Institut für Biochemie, 82152 Martinsried, Germany.
Biopolymers. 2000 Dec;54(7):489-500. doi: 10.1002/1097-0282(200012)54:7<489::AID-BIP20>3.0.CO;2-F.
The thioredoxin reductase active-site fragment H-Ala-Cys-Ala-Thr-Cys-Asp-Gly-Phe-OH [134-141], which is known for its high tendency to assume an almost identical conformation as in the intact enzyme, was backbone cyclized with the photoresponsive (4-amino)phenylazobenzoic acid (APB) to produce a monocyclic and disulfide-bridged bicyclic APB-peptide. Light-induced reversible cis/trans isomerization occurs at identical extents in both the linear and the two cyclic forms. Nuclear magnetic resonance conformational analysis clearly revealed that in the bicyclic APB-peptide both as a trans- and cis-azo-isomer the constraints imparted by the bicyclic structure do not allow the molecule to relax into a defined low energy conformation, thus making the molecule a frustrated system that flip-flops between multiple conformational states. Conversely, the monocyclic APB peptide folds into a well-defined lowest energy structure as a trans-azo-isomer, which upon photoisomerization to the cis-azo configuration relaxes into a less restricted conformational space. First femtosecond spectroscopic analysis of the dynamics of the photoreaction confirm a fast first phase on the femtosecond time scale related to the cis/trans isomerization of the azobenzene moiety followed by a slower phase in the picosecond time scale that involves an adjustment of the peptide backbone. Due to the well- defined photoresponsive two-state transition of this monocyclic peptide molecule, it represents a model system well suited for studying the ultrafast dynamics of conformational transitions by time-resolved spectroscopy.
硫氧还蛋白还原酶活性位点片段H-Ala-Cys-Ala-Thr-Cys-Asp-Gly-Phe-OH [134-141],因其具有与完整酶几乎相同构象的强烈倾向而闻名,该片段与光响应性(4-氨基)苯基偶氮苯甲酸(APB)进行主链环化,生成单环和二硫键桥联的双环APB肽。光诱导的可逆顺/反异构化在直线型和两种环型中以相同程度发生。核磁共振构象分析清楚地表明,在双环APB肽中,无论是反式还是顺式偶氮异构体,双环结构施加的限制都不允许分子弛豫到确定的低能量构象,从而使该分子成为一个在多个构象状态之间翻转的受挫系统。相反,单环APB肽作为反式偶氮异构体折叠成明确的最低能量结构,在光异构化为顺式偶氮构型后弛豫到限制较少的构象空间。对光反应动力学的首次飞秒光谱分析证实,在飞秒时间尺度上有一个与偶氮苯部分的顺/反异构化相关的快速第一阶段,随后在皮秒时间尺度上有一个较慢的阶段,这涉及肽主链的调整。由于这种单环肽分子具有明确界定的光响应双态转变,它代表了一个非常适合通过时间分辨光谱研究构象转变超快动力学的模型系统。