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非洲爪蟾卵母细胞核提取物中的核苷酸切除修复

Nucleotide excision repair in oocyte nuclear extracts from Xenopus laevis.

作者信息

Ackerman E J, Iakoucheva L M

机构信息

Pacific Northwest National Laboratory, Richland, Washington, 99352-0999, USA.

出版信息

Methods. 2000 Oct;22(2):188-93. doi: 10.1006/meth.2000.1060.

DOI:10.1006/meth.2000.1060
PMID:11020334
Abstract

We have developed efficient DNA repair extracts derived from the unusually large nuclei of Xenopus oocytes. These extracts use nucleotide excision repair (NER) to completely remove bulky adducts from DNA. There is very little or no synthesis on control, undamaged DNA, indicating the extracts do not have significant nonspecific nuclease activity, and repair of cyclobutane pyrimidine dimers (CPDs) occurs in the dark, indicating that NER, and not photolyase, is responsible for CPD repair. The extracts can be inactivated with antibodies specific to repair proteins and then repair activity can be restored by adding purified recombinant protein. Here we describe detailed protocols for preparing Xenopus nuclear repair extracts.

摘要

我们已经从非洲爪蟾卵母细胞异常大的细胞核中开发出了高效的DNA修复提取物。这些提取物利用核苷酸切除修复(NER)从DNA中完全去除大分子加合物。在对照的未受损DNA上几乎没有或没有合成,这表明提取物没有显著的非特异性核酸酶活性,并且环丁烷嘧啶二聚体(CPD)的修复在黑暗中发生,这表明负责CPD修复的是NER,而不是光解酶。提取物可以用针对修复蛋白的特异性抗体使其失活,然后通过添加纯化的重组蛋白来恢复修复活性。在这里,我们描述了制备非洲爪蟾核修复提取物的详细方案。

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1
Nucleotide excision repair in oocyte nuclear extracts from Xenopus laevis.非洲爪蟾卵母细胞核提取物中的核苷酸切除修复
Methods. 2000 Oct;22(2):188-93. doi: 10.1006/meth.2000.1060.
2
Nucleotide excision repair in nuclear extracts from Xenopus oocytes.非洲爪蟾卵母细胞核提取物中的核苷酸切除修复
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DNA polymerases alpha and beta are required for DNA repair in an efficient nuclear extract from Xenopus oocytes.非洲爪蟾卵母细胞的高效核提取物中,DNA修复需要DNA聚合酶α和β。
J Biol Chem. 1996 Jun 7;271(23):13816-20. doi: 10.1074/jbc.271.23.13816.
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Base excision repair assay using Xenopus laevis oocyte extracts.使用非洲爪蟾卵母细胞提取物进行碱基切除修复检测。
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The UV-damaged DNA binding protein mediates efficient targeting of the nucleotide excision repair complex to UV-induced photo lesions.紫外线损伤的DNA结合蛋白介导核苷酸切除修复复合物有效靶向紫外线诱导的光损伤。
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DNA polymerases eta and kappa are responsible for error-free translesion DNA synthesis activity over a cis-syn thymine dimer in Xenopus laevis oocyte extracts.在非洲爪蟾卵母细胞提取物中,DNA聚合酶η和κ负责在顺式胸腺嘧啶二聚体上进行无差错的跨损伤DNA合成活性。
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Identification of intrinsic order and disorder in the DNA repair protein XPA.DNA修复蛋白XPA中内在有序和无序结构的鉴定
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