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细菌中通过基因重组进行的修复:概述

Repair by genetic recombination in bacteria: overview.

作者信息

Howard-Flanders P

出版信息

Basic Life Sci. 1975;5A:265-74. doi: 10.1007/978-1-4684-2895-7_35.

DOI:10.1007/978-1-4684-2895-7_35
PMID:1103833
Abstract

DNA molecules that have been damaged in both strands at the same level are not subject to repair by excision but instead can be repaired through recombination with homologous molecules. Examples of two-strand damage include postreplication gaps opposite pyrimidine dimers, two-strand breaks produced by X-rays, and chemically induced interstrand cross-links. In ultraviolet-irradiated bacteria, the newly synthesized DNA is of length equal to the interdimer spacing. With continued incubation, this low-molecular-weight DNA is joined into high-molecular-weight chains (postreplication repair), a process associated with sister exchanges in bacteria. Recombination is initiated by pyrimidine dimers opposite postreplication gaps and by interstrand cross-links that have been cut by excision enzymes. The free ends at the resulting gaps presumably initiate the exchanges. Postreplication repair in Escherichia coli occurs in recB- AND RECC but is greatly slowed in recF- mutants. RecB and recC are the structural genes for exonuclease V, which digests two-stranded DNA by releasing oligonucleotides first from one strand and then from the other. The postreplication sister exchanges in ultra-violet-irradiated bacteria result in the distribution of pyrimidine dimers between parental and daughter strands, indicating that long exchanges involving both strands of each duplex occur. The R1 restriction endonuclease from E. COli has been used to cut the DNA of a bacterial drug-resistance transfer factor with one nuclease-sensitive site, and also DNA from the frog Xenopus enriched for ribosomal 18S and 28S genes. The fragments were annealed with the cut plasmid DNA and ligated, producing a new larger plasmid carrying the eukaryotic rDNA and able to infect and replicate in E. coli.

摘要

在同一水平上两条链都受损的DNA分子不能通过切除进行修复,而是可以通过与同源分子重组来修复。双链损伤的例子包括嘧啶二聚体对面的复制后缺口、X射线产生的双链断裂以及化学诱导的链间交联。在紫外线照射的细菌中,新合成的DNA长度等于二聚体间距。持续孵育后,这种低分子量DNA会连接成高分子量链(复制后修复),这一过程与细菌中的姐妹交换有关。重组由复制后缺口对面的嘧啶二聚体以及被切除酶切割的链间交联引发。由此产生的缺口处的自由端可能引发交换。大肠杆菌中的复制后修复发生在recB和recC基因存在时,但在recF突变体中会大大减慢。RecB和recC是外切核酸酶V的结构基因,外切核酸酶V通过先从一条链然后从另一条链释放寡核苷酸来消化双链DNA。紫外线照射的细菌中的复制后姐妹交换导致嘧啶二聚体在亲代链和子代链之间分布,这表明涉及每个双链体两条链的长交换发生。来自大肠杆菌的R1限制性内切酶已被用于切割具有一个核酸酶敏感位点的细菌抗药转移因子的DNA,以及来自非洲爪蟾的富含核糖体18S和28S基因的DNA。这些片段与切割后的质粒DNA退火并连接,产生一个携带真核rDNA且能够在大肠杆菌中感染和复制的新的更大质粒。

相似文献

1
Repair by genetic recombination in bacteria: overview.细菌中通过基因重组进行的修复:概述
Basic Life Sci. 1975;5A:265-74. doi: 10.1007/978-1-4684-2895-7_35.
2
recF-dependent and recF recB-independent DNA gap-filling repair processes transfer dimer-containing parental strands to daughter strands in Escherichia coli K-12 uvrB.在大肠杆菌K-12 uvrB中,recF依赖性和recF recB非依赖性DNA缺口填充修复过程将含二聚体的亲代链转移到子代链上。
J Bacteriol. 1984 May;158(2):727-9. doi: 10.1128/jb.158.2.727-729.1984.
3
Mechanisms for recF-dependent and recB-dependent pathways of postreplication repair in UV-irradiated Escherichia coli uvrB.紫外线照射的大肠杆菌uvrB中复制后修复的recF依赖性和recB依赖性途径的机制。
J Bacteriol. 1983 Dec;156(3):1093-8. doi: 10.1128/jb.156.3.1093-1098.1983.
4
Mechanism of sbcB-suppression of the recBC-deficiency in postreplication repair in UV-irradiated Escherichia coli K-12.紫外线照射的大肠杆菌K-12中sbcB抑制recBC缺陷在复制后修复中的机制。
Mol Gen Genet. 1985;201(2):186-91. doi: 10.1007/BF00425658.
5
Different effects of recJ and recN mutations on the postreplication repair of UV-damaged DNA in Escherichia coli K-12.recJ和recN突变对大肠杆菌K-12中紫外线损伤DNA复制后修复的不同影响。
J Bacteriol. 1988 Jun;170(6):2555-9. doi: 10.1128/jb.170.6.2555-2559.1988.
6
recA (Srf) suppression of recF deficiency in the postreplication repair of UV-irradiated Escherichia coli K-12.recA(Srf)对紫外线照射的大肠杆菌K-12复制后修复中recF缺陷的抑制作用。
J Bacteriol. 1986 Nov;168(2):940-6. doi: 10.1128/jb.168.2.940-946.1986.
7
Distribution of pyrimidine dimers during postreplication repair in UV-irradiated excision-deficient cells of Escherichia coli K12.嘧啶二聚体在紫外线照射的大肠杆菌K12切除缺陷细胞复制后修复过程中的分布
Basic Life Sci. 1975;5A:317-20. doi: 10.1007/978-1-4684-2895-7_42.
8
Postreplicational formation and repair of DNA double-strand breaks in UV-irradiated Escherichia coli uvrB cells.紫外线照射的大肠杆菌uvrB细胞中DNA双链断裂的复制后形成与修复
Mutat Res. 1986 Jan;165(1):39-44. doi: 10.1016/0167-8817(86)90007-6.
9
recA-dependent DNA repair in UV-irradiated Escherichia coli.紫外线照射的大肠杆菌中依赖RecA的DNA修复
J Photochem Photobiol B. 1987 Sep;1(1):1-11. doi: 10.1016/1011-1344(87)80002-7.
10
Recombination and postreplication repair.重组与复制后修复。
Basic Life Sci. 1975;5A:307-12. doi: 10.1007/978-1-4684-2895-7_40.

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The rarA gene as part of an expanded RecFOR recombination pathway: Negative epistasis and synthetic lethality with ruvB, recG, and recQ.
rarA 基因作为扩展的 RecFOR 重组途径的一部分:与 ruvB、recG 和 recQ 的负上位性和合成致死性。
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Events associated with DNA replication disruption are not observed in hydrogen peroxide-treated Escherichia coli.在过氧化氢处理的大肠杆菌中未观察到与 DNA 复制中断相关的事件。
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Frequent template switching in postreplication gaps: suppression of deleterious consequences by the Escherichia coli Uup and RadD proteins.复制后间隙中频繁的模板转换:大肠杆菌 Uup 和 RadD 蛋白对有害后果的抑制。
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A single hydrophobic cleft in the Escherichia coli processivity clamp is sufficient to support cell viability and DNA damage-induced mutagenesis in vivo.大肠杆菌延伸因子 clamp 中的单一疏水性裂缝足以支持细胞活力和体内 DNA 损伤诱导的突变。
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Reconstitution of initial steps of dsDNA break repair by the RecF pathway of E. coli.通过大肠杆菌的RecF途径重建双链DNA断裂修复的初始步骤。
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Inactivation of the DnaB helicase leads to the collapse and degradation of the replication fork: a comparison to UV-induced arrest.DnaB解旋酶的失活会导致复制叉的崩溃和降解:与紫外线诱导的停滞的比较。
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The mei-9 alpha mutant of Drosophila melanogaster increases mutagen sensitivity and decreases excision repair.黑腹果蝇的mei-9α突变体增加了诱变敏感性并降低了切除修复能力。
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