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来自嗜热栖热菌的一种极其耐热的2-酮-3-脱氧-D-葡萄糖酸醛缩酶的初步晶体学研究。

Preliminary crystallographic studies of an extremely thermostable KDG aldolase from Sulfolobus solfataricus.

作者信息

Hendry E J, Buchanan C L, Russell R J, Hough D W, Reeve C D, Danson M J, Taylor G L

机构信息

Centre for Extremophile Research, Department of Biology and Biochemistry, University of Bath, Bath BA2 7AY, England.

出版信息

Acta Crystallogr D Biol Crystallogr. 2000 Nov;56(Pt 11):1437-9. doi: 10.1107/s0907444900009859.

Abstract

Crystals have been grown of 2-keto-3-deoxygluconate aldolase (KDG aldolase) from the hyperthermophilic archaeon Sulfolobus solfataricus that diffract to 2.2 A resolution. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. S. solfataricus grows optimally at 353 K and the enzyme itself has a half-life of 2.5 h at 373 K. Knowledge of the crystal structure of KDG aldolase will further understanding of the basis of protein hyperthermostability and create a target for site-directed mutagenesis of active-site residues, with the aim of altering substrate specificity. Three crystal forms have been obtained: orthorhombic crystals of space group P2(1)2(1)2(1), which diffract to beyond 2.15 A, monoclinic crystals of space group C2, which diffract to 2.2 A, and cubic crystals of space group P4(2)32, which diffract to 3.4 A.

摘要

已从嗜热古菌嗜热栖热菌(Sulfolobus solfataricus)中培养出2-酮-3-脱氧葡萄糖酸醛缩酶(KDG醛缩酶)的晶体,其衍射分辨率达到2.2埃。该酶催化2-酮-3-脱氧葡萄糖酸可逆地醛醇裂解为丙酮酸和甘油醛,这是葡萄糖氧化的改良非磷酸化Entner-Doudoroff途径的第三步。嗜热栖热菌在353 K时生长最佳,该酶本身在373 K时的半衰期为2.5小时。了解KDG醛缩酶的晶体结构将进一步加深对蛋白质超嗜热性基础的理解,并为活性位点残基的定点诱变创造一个靶点,目的是改变底物特异性。已获得三种晶体形式:空间群为P2(1)2(1)2(1)的正交晶体,其衍射分辨率超过2.15埃;空间群为C2的单斜晶体,其衍射分辨率为2.2埃;以及空间群为P4(2)32的立方晶体,其衍射分辨率为3.4埃。

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