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An improved protocol for the preparation of protoplasts from an established Arabidopsis thaliana cell suspension culture and infection with RNA of turnip yellow mosaic tymovirus: a simple and reliable method.一种从已建立的拟南芥细胞悬浮培养物中制备原生质体并接种芜菁黄花叶病毒RNA的改进方案:一种简单可靠的方法。
J Virol Methods. 2000 Apr;86(1):85-94. doi: 10.1016/s0166-0934(99)00173-1.
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Genome activation in alfamo- and ilarviruses.苜蓿花叶病毒属和等轴不稳环斑病毒属中的基因组激活
Arch Virol. 1999;144(5):843-63. doi: 10.1007/s007050050551.
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Subgenomic mRNA regulation by a distal RNA element in a (+)-strand RNA virus.正链RNA病毒中远端RNA元件对亚基因组mRNA的调控
RNA. 1999 Apr;5(4):550-61. doi: 10.1017/s1355838299982080.
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Minimal sequence and structural requirements of a subgenomic RNA promoter for turnip crinkle virus.芜菁皱缩病毒亚基因组RNA启动子的最小序列和结构要求
Virology. 1999 Jan 20;253(2):327-36. doi: 10.1006/viro.1998.9538.
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RNA-mediated trans-activation of transcription from a viral RNA.RNA介导的从病毒RNA转录的反式激活
Science. 1998 Aug 7;281(5378):829-32. doi: 10.1126/science.281.5378.829.
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Mutations that alter a conserved element upstream of the potato virus X triple block and coat protein genes affect subgenomic RNA accumulation.改变马铃薯X病毒三联体阻断基因和外壳蛋白基因上游保守元件的突变会影响亚基因组RNA的积累。
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Analysis of the two subgenomic RNA promoters for turnip crinkle virus in vivo and in vitro.芜菁皱缩病毒两个亚基因组RNA启动子的体内和体外分析。
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Gene expression from viral RNA genomes.来自病毒RNA基因组的基因表达。
Plant Mol Biol. 1996 Oct;32(1-2):367-91. doi: 10.1007/BF00039391.
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Mapping of the red clover necrotic mosaic virus subgenomic RNA.红三叶草坏死花叶病毒亚基因组RNA的定位
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Deletion analysis of the promoter for the cucumber necrosis virus 0.9-kb subgenomic RNA.黄瓜坏死病毒0.9kb亚基因组RNA启动子的缺失分析
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芜菁黄花叶芜菁黄花叶病毒亚基因组启动子的鉴定与功能分析。

Identification and functional analysis of the turnip yellow mosaic tymovirus subgenomic promoter.

作者信息

Schirawski J, Voyatzakis A, Zaccomer B, Bernardi F, Haenni A L

机构信息

Institut Jacques Monod, 75251 Paris Cedex 05, France.

出版信息

J Virol. 2000 Dec;74(23):11073-80. doi: 10.1128/jvi.74.23.11073-11080.2000.

DOI:10.1128/jvi.74.23.11073-11080.2000
PMID:11070002
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC113187/
Abstract

Most plant viruses rely on the production of subgenomic RNAs (sgRNAs) for the expression of their genes and survival in the plant. Although this is a widely adopted strategy among viruses, the mechanism(s) whereby sgRNA production occurs remains poorly defined. Turnip yellow mosaic tymovirus (TYMV) is a positive-stranded RNA virus that produces an sgRNA for the expression of its coat protein. Here we report that the subgenomic promoter sequence of TYMV is located on a 494-nucleotide fragment, containing previously identified highly conserved sequence elements, which are shown here to be essential for promoter function. After duplication, the subgenomic promoter can be inserted into the coat protein open reading frame, giving rise to the in vivo production of a second sgRNA. It is suggested that this promoter can function when contained on a different molecule than viral genomic RNA. This interesting trait may be of general use for plant and plant virus research.

摘要

大多数植物病毒依靠亚基因组RNA(sgRNA)的产生来表达其基因并在植物中存活。尽管这是病毒中广泛采用的一种策略,但sgRNA产生的机制仍不清楚。芜菁黄花叶病毒(TYMV)是一种正链RNA病毒,它产生一种sgRNA来表达其外壳蛋白。在此我们报道,TYMV的亚基因组启动子序列位于一个494个核苷酸的片段上,该片段包含先前鉴定出的高度保守的序列元件,本文显示这些元件对启动子功能至关重要。复制后,亚基因组启动子可插入外壳蛋白开放阅读框,从而在体内产生第二种sgRNA。有人认为,当该启动子包含在与病毒基因组RNA不同的分子上时也能发挥作用。这一有趣的特性可能在植物和植物病毒研究中具有普遍用途。