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从黑猩猩中分离得到的猿猴TTV分离株的全长核苷酸序列:一种新的类TTV病毒物种的证据

Full-length nucleotide sequence of a simian TT virus isolate obtained from a chimpanzee: evidence for a new TT virus-like species.

作者信息

Inami T, Obara T, Moriyama M, Arakawa Y, Abe K

机构信息

Department of Pathology, National Institute of Infectious Diseases, Tokyo, Japan.

出版信息

Virology. 2000 Nov 25;277(2):330-5. doi: 10.1006/viro.2000.0621.

DOI:10.1006/viro.2000.0621
PMID:11080480
Abstract

Recently, we identified TT virus (TTV) isolates from nonhuman primates and named them simian TTV (s-TTV). To characterize the genomic structure of these isolates in more detail, the full-length nucleotide sequence of the s-TTV isolate (designated s-TTV CH65-1), recovered from a chimpanzee born in West Africa, was amplified by nested PCR with inverted primers deduced from the untranslated region of s-TTV DNA. CH65-1 was composed of 3899 nucleotides (nt) and had two open reading frames (ORF) spanning 2295 nt (ORF1) and 402 nt (ORF2). The sequence had only 52.3% similarity to the prototype TA278 human isolate. Phylogenetic analysis demonstrated that CH65-1 was distinct from the human TTV isolates. These results suggested that s-TTV may represent a new TTV-like viral species or genus.

摘要

最近,我们从非人类灵长类动物中鉴定出了TT病毒(TTV)分离株,并将它们命名为猿猴TTV(s-TTV)。为了更详细地描述这些分离株的基因组结构,我们使用从s-TTV DNA非翻译区推导的反向引物,通过巢式PCR扩增了从一只出生于西非的黑猩猩身上获得的s-TTV分离株(命名为s-TTV CH65-1)的全长核苷酸序列。CH65-1由3899个核苷酸(nt)组成,有两个开放阅读框(ORF),分别跨越2295 nt(ORF1)和402 nt(ORF2)。该序列与原型TA278人类分离株的相似性仅为52.3%。系统发育分析表明,CH65-1与人类TTV分离株不同。这些结果表明,s-TTV可能代表一种新的TTV样病毒种或属。

相似文献

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Full-length nucleotide sequence of a simian TT virus isolate obtained from a chimpanzee: evidence for a new TT virus-like species.从黑猩猩中分离得到的猿猴TTV分离株的全长核苷酸序列:一种新的类TTV病毒物种的证据
Virology. 2000 Nov 25;277(2):330-5. doi: 10.1006/viro.2000.0621.
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