• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

渐渗系水稻植株中反转录转座子激活后迅速受到抑制

Retrotransposon activation followed by rapid repression in introgressed rice plants.

作者信息

Liu B, Wendel J F

机构信息

Institute of Genetics and Cytology, Northeast Normal University, Changchun, China.

出版信息

Genome. 2000 Oct;43(5):874-80.

PMID:11081978
Abstract

Plant retrotransposons are largely inactive during normal development, but may be activated by stresses. Both copia-like and gypsy-like retrotransposons of rice were activated by introgression of DNA from the wild species Zizania latifolia Griseb. The copy number increase was associated with cytosine methylation changes of the elements. Activity of the elements was ephemeral, as evidenced by nearly identical genomic Southern hybridization patterns among randomly chosen individuals both within and between generations for a given line, and the absence of transcripts based on Northern analysis. DNA hypermethylation, internal sequence deletion, and possibly other mechanisms are likely responsible for the rapid element repression. Implications of the retroelement dynamics on plant genome evolution are discussed.

摘要

植物逆转录转座子在正常发育过程中大多处于不活跃状态,但可能会因胁迫而被激活。通过导入野生种菰(Zizania latifolia Griseb.)的DNA,水稻中类copia和类gypsy逆转录转座子均被激活。拷贝数的增加与这些元件的胞嘧啶甲基化变化有关。这些元件的活性是短暂的,这一点从给定株系内和不同世代间随机选择的个体具有几乎相同的基因组Southern杂交模式以及Northern分析未检测到转录本可以得到证明。DNA超甲基化、内部序列缺失以及可能的其他机制可能是导致这些元件迅速受到抑制的原因。本文讨论了逆转录元件动态变化对植物基因组进化的影响。

相似文献

1
Retrotransposon activation followed by rapid repression in introgressed rice plants.渐渗系水稻植株中反转录转座子激活后迅速受到抑制
Genome. 2000 Oct;43(5):874-80.
2
Mobilized retrotransposon Tos17 of rice by alien DNA introgression transposes into genes and causes structural and methylation alterations of a flanking genomic region.通过外源DNA渗入激活的水稻反转录转座子Tos17可转座进入基因,并导致侧翼基因组区域的结构和甲基化改变。
Hereditas. 2004;141(3):243-51. doi: 10.1111/j.1601-5223.2004.01808.x.
3
Extent and pattern of DNA methylation alteration in rice lines derived from introgressive hybridization of rice and Zizania latifolia Griseb.水稻与菰属间渐渗杂交衍生系中DNA甲基化变化的程度和模式
Theor Appl Genet. 2006 Jul;113(2):196-205. doi: 10.1007/s00122-006-0286-2. Epub 2006 May 5.
4
Activation of a rice endogenous retrotransposon Tos17 in tissue culture is accompanied by cytosine demethylation and causes heritable alteration in methylation pattern of flanking genomic regions.水稻内源反转录转座子Tos17在组织培养中的激活伴随着胞嘧啶去甲基化,并导致侧翼基因组区域甲基化模式的可遗传改变。
Theor Appl Genet. 2004 Jun;109(1):200-9. doi: 10.1007/s00122-004-1618-8. Epub 2004 Apr 8.
5
Transpositional reactivation of two LTR retrotransposons in rice-Zizania recombinant inbred lines (RILs).水稻-菰重组自交系中转座子 LTR 逆转录转座的激活。
Hereditas. 2010 Dec;147(6):264-77. doi: 10.1111/j.1601-5223.2010.02181.x. Epub 2010 Nov 18.
6
Isolation and characterization of a set of disease resistance-gene analogs (RGAs) from wild rice, Zizania latifolia Griseb. I. Introgression, copy number lability, sequence change, and DNA methylation alteration in several rice-Zizania introgression lines.菰(Zizania latifolia Griseb.)中一组抗病基因类似物(RGAs)的分离与鉴定。I. 几个水稻-菰渐渗系中的渐渗、拷贝数变异、序列变化及DNA甲基化改变
Genome. 2006 Feb;49(2):150-8. doi: 10.1139/g05-097.
7
Extensive alterations in DNA methylation and transcription in rice caused by introgression from Zizania latifolia.菰基因渗入导致水稻DNA甲基化和转录发生广泛改变。
Plant Mol Biol. 2004 Mar;54(4):571-82. doi: 10.1023/B:PLAN.0000038270.48326.7a.
8
Loss of function mutations in the rice chromomethylase OsCMT3a cause a burst of transposition.水稻色氨酸甲基转移酶 OsCMT3a 的功能丧失突变导致转座爆发。
Plant J. 2015 Sep;83(6):1069-81. doi: 10.1111/tpj.12952.
9
Extensive de Novo genomic variation in rice induced by introgression from wild rice (Zizania latifolia Griseb.).菰(Zizania latifolia Griseb.)渗入诱导水稻产生广泛的新生基因组变异。
Genetics. 2005 Aug;170(4):1945-56. doi: 10.1534/genetics.105.040964. Epub 2005 Jun 3.
10
Transpositional reactivation of the Dart transposon family in rice lines derived from introgressive hybridization with Zizania latifolia.转座子 Dart 家族在籼稻渐渗杂交系中的转座激活。
BMC Plant Biol. 2010 Aug 26;10:190. doi: 10.1186/1471-2229-10-190.

引用本文的文献

1
Long-read sequencing of extrachromosomal circular DNA and genome assembly of a Solanum lycopersicum breeding line revealed active LTR retrotransposons originating from S. Peruvianum L. introgressions.对一个番茄育种系的染色体外环状DNA进行长读长测序和基因组组装,揭示了源自秘鲁番茄渗入的活跃LTR反转录转座子。
BMC Genomics. 2024 Apr 24;25(1):404. doi: 10.1186/s12864-024-10314-1.
2
The Genomic Shock Hypothesis: Genetic and Epigenetic Alterations of Transposable Elements after Interspecific Hybridization in Plants.基因组冲击假说:植物种间杂交后转座元件的遗传和表观遗传改变
Epigenomes. 2023 Dec 27;8(1):2. doi: 10.3390/epigenomes8010002.
3
Expression pattern of resynthesized allotetraploid Capsella is determined by hybridization, not whole-genome duplication.
合成的异源四倍体荠菜的表达模式是由杂交决定的,而不是全基因组加倍决定的。
New Phytol. 2023 Jan;237(1):339-353. doi: 10.1111/nph.18542. Epub 2022 Nov 7.
4
The relationship between transposable elements and ecological niches in the Greater Cape Floristic Region: A study on the genus (Asteraceae).开普植物区系大区中转座元件与生态位的关系:关于**属**(菊科)的一项研究。 注:原文中“the genus ”这里“**属**”部分原文缺失具体属名。
Front Plant Sci. 2022 Sep 29;13:982852. doi: 10.3389/fpls.2022.982852. eCollection 2022.
5
Interspecific hybridization in tomato influences endogenous viral sRNAs and alters gene expression.番茄种间杂交影响内源性病毒小 RNA 并改变基因表达。
Genome Biol. 2022 May 21;23(1):120. doi: 10.1186/s13059-022-02685-z.
6
The Structural, Functional and Evolutionary Impact of Transposable Elements in Eukaryotes.转座子在真核生物中的结构、功能和进化影响。
Genes (Basel). 2021 Jun 15;12(6):918. doi: 10.3390/genes12060918.
7
The challenges of predicting transposable element activity in hybrids.预测杂种中转座元件活性的挑战。
Curr Genet. 2021 Aug;67(4):567-572. doi: 10.1007/s00294-021-01169-0. Epub 2021 Mar 18.
8
Evolutionary Dynamics of Transposable Elements Following a Shared Polyploidization Event in the Tribe Andropogoneae.多倍体化事件后,在禾本科 Andropogoneae 族中转座元件的进化动态。
G3 (Bethesda). 2020 Dec 3;10(12):4387-4398. doi: 10.1534/g3.120.401596.
9
The effect of hybridization on transposable element accumulation in an undomesticated fungal species.杂交对一个非驯化真菌物种中转座元件积累的影响。
Elife. 2020 Sep 21;9:e60474. doi: 10.7554/eLife.60474.
10
Drosophila Interspecific Hybridization Causes A Deregulation of the piRNA Pathway Genes.果蝇种间杂交导致 piRNA 通路基因失活。
Genes (Basel). 2020 Feb 19;11(2):215. doi: 10.3390/genes11020215.