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一种耐药外排泵作用的动力学模型。

A kinetic model for the action of a resistance efflux pump.

作者信息

Walmsley A R, Zhou T, Borges-Walmsley M I, Rosen B P

机构信息

Division of Infection and Immunity, the Institute of Biomedical and Life Sciences, Robertson Building, The University of Glasgow, Glasgow G11 6NU, Scotland, United Kingdom.

出版信息

J Biol Chem. 2001 Mar 2;276(9):6378-91. doi: 10.1074/jbc.M008105200. Epub 2000 Nov 28.

DOI:10.1074/jbc.M008105200
PMID:11096086
Abstract

ArsA is the catalytic subunit of the arsenical pump, coupling ATP hydrolysis to the efflux of arsenicals through the ArsB membrane protein. It is a paradigm for understanding the structure-function of the nucleotide binding domains (NBD) of medically important efflux pumps, such as P-glycoprotein, because it has two sequence-related, interacting NBD, for which the structure is known. On the basis of a rigorous analysis of the pre-steady-state kinetics of nucleotide binding and hydrolysis, we propose a model in which ArsA alternates between two mutually exclusive conformations as follows: the ArsA(1) conformation in which the A1 site is closed but the A2 site open; and the ArsA(2) conformation, in which the A1 and A2 sites are open and closed, respectively. Antimonite elicits its effects by sequestering ArsA in the ArsA(1) conformation, which catalyzes rapid ATP hydrolysis at the A2 site to drive ArsA between conformations that have high (nucleotide-bound ArsA) and low affinity (nucleotide-free ArsA) for Sb(III). ArsA potentially utilizes this process to sequester Sb(III) from the medium and eject it into the channel of ArsB.

摘要

ArsA是砷泵的催化亚基,它将ATP水解与砷通过ArsB膜蛋白的外排相偶联。它是理解医学上重要的外排泵(如P-糖蛋白)核苷酸结合结构域(NBD)结构与功能的范例,因为它有两个序列相关且相互作用的NBD,其结构是已知的。基于对核苷酸结合和水解的预稳态动力学的严格分析,我们提出了一个模型,其中ArsA在两种互斥构象之间交替如下:ArsA(1)构象,其中A1位点关闭但A2位点开放;以及ArsA(2)构象,其中A1和A2位点分别开放和关闭。亚锑酸盐通过将ArsA隔离在ArsA(1)构象中来发挥其作用,该构象催化A2位点的快速ATP水解,以驱动ArsA在对Sb(III)具有高亲和力(核苷酸结合的ArsA)和低亲和力(无核苷酸的ArsA)的构象之间转换。ArsA可能利用这个过程从培养基中隔离Sb(III)并将其排入ArsB的通道。

相似文献

1
A kinetic model for the action of a resistance efflux pump.一种耐药外排泵作用的动力学模型。
J Biol Chem. 2001 Mar 2;276(9):6378-91. doi: 10.1074/jbc.M008105200. Epub 2000 Nov 28.
2
Antimonite regulation of the ATPase activity of ArsA, the catalytic subunit of the arsenical pump.锑酸盐对砷泵催化亚基ArsA的ATP酶活性的调节作用
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Structure of the ArsA ATPase: the catalytic subunit of a heavy metal resistance pump.抗砷ATP酶的结构:一种重金属抗性泵的催化亚基。
EMBO J. 2000 Sep 1;19(17):4838-45. doi: 10.1093/emboj/19.17.4838.
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Nucleotide binding to the C-terminal nucleotide binding domain of ArsA. Studies with an ATP analogue, 5'-p-fluorosulfonylbenzoyladenosine.核苷酸与ArsA的C端核苷酸结合结构域的结合。使用ATP类似物5'-对氟磺酰苯甲酰腺苷的研究。
J Biol Chem. 1998 Apr 10;273(15):9243-8. doi: 10.1074/jbc.273.15.9243.
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Substrate-induced dimerization of the ArsA protein, the catalytic component of an anion-translocating ATPase.底物诱导的ArsA蛋白二聚化,ArsA蛋白是一种阴离子转运ATP酶的催化成分。
J Biol Chem. 1991 Feb 5;266(4):2327-32.
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The ATPase mechanism of ArsA, the catalytic subunit of the arsenite pump.亚砷酸盐泵催化亚基ArsA的ATP酶机制。
J Biol Chem. 1999 Jun 4;274(23):16153-61. doi: 10.1074/jbc.274.23.16153.
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Structure-function relationships in an anion-translocating ATPase.阴离子转运ATP酶中的结构-功能关系
Biochem Soc Trans. 2000;28(4):520-6.
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Asp45 is a Mg2+ ligand in the ArsA ATPase.天冬氨酸45是砷酸ATP酶中的一个镁离子配体。
J Biol Chem. 1999 May 14;274(20):13854-8. doi: 10.1074/jbc.274.20.13854.
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Molecular characterization of an anion pump. The ArsB protein is the membrane anchor for the ArsA protein.一种阴离子泵的分子特征。ArsB蛋白是ArsA蛋白的膜锚定蛋白。
J Biol Chem. 1990 Jan 5;265(1):190-4.
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Biochemical evidence for interaction between the two nucleotide binding domains of ArsA. Insights from mutants and ATP analogs.ArsA两个核苷酸结合结构域之间相互作用的生化证据。来自突变体和ATP类似物的见解。
J Biol Chem. 2003 Feb 21;278(8):6603-9. doi: 10.1074/jbc.M211845200. Epub 2002 Dec 16.

引用本文的文献

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Arsenic binding and transfer by the ArsD As(III) metallochaperone.砷结合和 ArsD As(III) 金属伴侣蛋白的转移。
Biochemistry. 2010 May 4;49(17):3658-66. doi: 10.1021/bi100026a.
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Role of signature lysines in the deviant walker a motifs of the ArsA ATPase.ARS(A) 腺苷酸激酶的反常行走模体中天冬氨酸残基的作用。
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Role of conserved aspartates in the ArsA ATPase.保守天冬氨酸在ArsA ATP酶中的作用。
Biochemistry. 2008 Jul 8;47(27):7218-27. doi: 10.1021/bi800715h. Epub 2008 Jun 14.
4
Antimonite regulation of the ATPase activity of ArsA, the catalytic subunit of the arsenical pump.锑酸盐对砷泵催化亚基ArsA的ATP酶活性的调节作用
Biochem J. 2001 Dec 15;360(Pt 3):589-97. doi: 10.1042/0264-6021:3600589.