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迈向定义聚糖作为信息存储和传递中的硬件的作用:基本原理、实验方法及最新进展。

Towards defining the role of glycans as hardware in information storage and transfer: basic principles, experimental approaches and recent progress.

作者信息

Solís D, Jiménez-Barbero J, Kaltner H, Romero A, Siebert H C, von der Lieth C W, Gabius H J

机构信息

Instituto de Química Física Rocasolano, Consejo Superior de Investigaciones Científicas, Madrid, Spain.

出版信息

Cells Tissues Organs. 2001;168(1-2):5-23. doi: 10.1159/000016802.

Abstract

The term 'code' in biological information transfer appears to be tightly and hitherto exclusively connected with the genetic code based on nucleotides and translated into functional activities via proteins. However, the recent appreciation of the enormous coding capacity of oligosaccharide chains of natural glycoconjugates has spurred to give heed to a new concept: versatile glycan assembly by the genetically encoded glycosyltransferases endows cells with a probably not yet fully catalogued array of meaningful messages. Enciphered by sugar receptors such as endogenous lectins the information of code words established by a series of covalently linked monosaccharides as letters for example guides correct intra- and intercellular routing of glycoproteins, modulates cell proliferation or migration and mediates cell adhesion. Evidently, the elucidation of the structural frameworks and the recognition strategies within the operation of the sugar code poses a fascinating conundrum. The far-reaching impact of this recognition mode on the level of cells, tissues and organs has fueled vigorous investigations to probe the subtleties of protein-carbohydrate interactions. This review presents information on the necessarily concerted approach using X-ray crystallography, molecular modeling, nuclear magnetic resonance spectroscopy, thermodynamic analysis and engineered ligands and receptors. This part of the treatise is flanked by exemplarily chosen insights made possible by these techniques.

摘要

在生物信息传递中,“密码”一词似乎一直紧密且唯一地与基于核苷酸的遗传密码相关联,并通过蛋白质转化为功能活性。然而,最近对天然糖缀合物寡糖链巨大编码能力的认识促使人们关注一个新的概念:由基因编码的糖基转移酶进行的多功能聚糖组装赋予细胞一系列可能尚未完全编目的有意义信息。由诸如内源性凝集素等糖受体编码,由一系列共价连接的单糖作为字母组成的密码信息,例如指导糖蛋白在细胞内和细胞间的正确转运,调节细胞增殖或迁移并介导细胞粘附。显然,阐明糖密码运作中的结构框架和识别策略构成了一个引人入胜的难题。这种识别模式在细胞、组织和器官水平上的深远影响推动了大量研究,以探究蛋白质 - 碳水化合物相互作用的微妙之处。本综述介绍了使用X射线晶体学、分子建模、核磁共振光谱、热力学分析以及工程化配体和受体等协同方法的相关信息。本论文的这一部分两侧辅以这些技术所带来的示例性见解。

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