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半子囊菌酵母的基因组探索:2. 数据生成与处理。

Genomic exploration of the hemiascomycetous yeasts: 2. Data generation and processing.

作者信息

Artiguenave F, Wincker P, Brottier P, Duprat S, Jovelin F, Scarpelli C, Verdier J, Vico V, Weissenbach J, Saurin W

机构信息

GENOSCOPE, Centre National de Séquençage, 2 rue Gaston Crémieux, P.O. Box 91, Cedex, F-Evry, France.

出版信息

FEBS Lett. 2000 Dec 22;487(1):13-6. doi: 10.1016/s0014-5793(00)02273-0.

Abstract

The generation of sequencing data for the hemiascomycetous yeast random sequence tag project was performed using the procedures established at GENOSCOPE. These procedures include a series of protocols for the sequencing reactions, using infra-red labelled primers, performed on both ends of the plasmid inserts in the same reaction tube, and their analysis on automated DNA sequencers. They also include a package of computer programs aimed at detecting potential assignation errors, selecting good quality sequences and estimating their useful length.

摘要

半子囊菌酵母随机序列标签项目的测序数据生成是按照GENOSCOPE制定的程序进行的。这些程序包括一系列测序反应方案,使用红外标记引物,在同一反应管中对质粒插入片段的两端进行测序反应,并在自动DNA测序仪上进行分析。它们还包括一套计算机程序,旨在检测潜在的分配错误、选择高质量序列并估计其有效长度。

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