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头孢菌素和青霉素的电子结构。4. β-内酰胺环酰化作用的建模

Electronic structures of cephalosporins and penicillins. 4. Modeling acylation by the beta-lactam ring.

作者信息

Boyd D B, Hermann R B, Presti D E, Marsh M M

出版信息

J Med Chem. 1975 Apr;18(4):408-17. doi: 10.1021/jm00238a018.

DOI:10.1021/jm00238a018
PMID:1121009
Abstract

Molecular orbital calculations by the CNDO/2 method are used to study the molecular and electronic details involved in the initial phases of the opening of the beta-lactam ring of a model cephalosporin structure, 7-amino-3-acetoxymethyl-3-cephem. The effect of a simple nucleophile, OH-, approaching the carbonyl carbon center of the beta-lactam ring is monitored by following the charge redistributions that occur in the bicyclic system and in the 3 side chain. A migration of electron density to the ester oxygen of the CH2OAc group is observed with concomitant weakening of the CH2-OAc bond. The results are discussed in relation to the mechanism of acylation of bacterial cell wall enzymes by beta-lactam antibiotics and in relation to the hydrolysis of these molecules. The results indicate that the ability of the 3' substituent of cephalosporins to stabilize electron density transferred to it, i.e., the leavability of the 3' moiety, can be an important factor in activating the beta-lactam toward nucleophilic attack.

摘要

采用CNDO/2方法进行分子轨道计算,以研究模型头孢菌素结构7-氨基-3-乙酰氧甲基-3-头孢烯β-内酰胺环开环初始阶段所涉及的分子和电子细节。通过跟踪双环系统和3-侧链中发生的电荷重新分布,监测简单亲核试剂OH-接近β-内酰胺环羰基碳中心的影响。观察到电子密度向CH2OAc基团的酯氧迁移,同时CH2-OAc键减弱。结合β-内酰胺抗生素对细菌细胞壁酶的酰化机制以及这些分子的水解对结果进行了讨论。结果表明,头孢菌素3'-取代基稳定转移至其上的电子密度的能力,即3'-部分的离去能力,可能是激活β-内酰胺以进行亲核攻击的一个重要因素。

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J Med Chem. 1975 Apr;18(4):408-17. doi: 10.1021/jm00238a018.
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引用本文的文献

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Molecular Features of Cephalosporins Important for Activity against Antimicrobial-Resistant .对耐抗菌药物具有活性的头孢菌素的分子特征
ACS Infect Dis. 2021 Feb 12;7(2):293-308. doi: 10.1021/acsinfecdis.0c00400. Epub 2021 Feb 3.
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Expression of a cephalosporin C esterase gene in Acremonium chrysogenum for the direct production of deacetylcephalosporin C.
头孢菌素C酯酶基因在产黄顶孢霉中的表达以直接生产去乙酰头孢菌素C。
J Ind Microbiol Biotechnol. 2004 Dec;31(11):531-9. doi: 10.1007/s10295-004-0183-0. Epub 2004 Nov 13.
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On the electrostatic and steric similarity of lactam compounds and the natural substrate for bacterial cell-wall biosynthesis.关于内酰胺化合物与细菌细胞壁生物合成天然底物的静电和空间相似性
J Comput Aided Mol Des. 1996 Apr;10(2):107-22. doi: 10.1007/BF00402819.
5
Transition state structures of a dipeptide related to the mode of action of beta-lactam antibiotics.与β-内酰胺类抗生素作用模式相关的二肽的过渡态结构。
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