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人类Pax5外显子1A的5'-非翻译区中的一个阻遏元件。

A repressor element in the 5'-untranslated region of human Pax5 exon 1A.

作者信息

Rahman M, Hirabayashi Y, Ishii T, Kodera T, Watanabe M, Takasawa N, Sasaki T

机构信息

Department of Rheumatology and Hematology, School of Medicine, Tohoku University, 1-1 Seiryo-cho, Aoba-ku, Sendai, 980-8574, Japan.

出版信息

Gene. 2001 Jan 24;263(1-2):59-66. doi: 10.1016/s0378-1119(00)00580-1.

Abstract

B-cell-specific activator protein (BSAP) encoded by the Pax5 gene plays a critical role during B-cell development. We have analyzed the 5'-flanking region plus the 5'-untranslated region (5'-UTR) of human Pax5 exon1A to clarify its regulatory mechanisms. Functional dissection of these regions by luciferase reporter assays indicated that a cluster of regulatory elements acts as a strong repressor between +320 and +453. Insertion of this segment between the heterologous simian virus 40 (SV40) promoter and the luciferase gene in both the sense and reverse orientation sharply reduced the luciferase activity, but insertion into the upstream of the SV40 promoter did not. This suggests that this segment must be located in the 5'-UTR to function effectively. A search through databases with the sequence of this segment did not reveal any known DNA binding factor site. Electrophoretic gel mobility shift assay (EMSA) experiments demonstrated that unknown factors bound to the fragment +408 to +429. Insertion of this fragment between the SV40 promoter and the reporter gene strongly suppressed the luciferase activity. Competitive EMSA indicated that the region between nucleotides +413 and +427 encompassed the binding site of the unknown factors and was hence regarded as a repressor element. Mutagenesis in this element significantly recovered reporter gene activity. These results suggest that the segment +320 to +453, especially the repressor element +413 to +427, in the 5'-UTR is involved in the regulation of Pax5 gene expression.

摘要

由Pax5基因编码的B细胞特异性激活蛋白(BSAP)在B细胞发育过程中发挥着关键作用。我们分析了人类Pax5外显子1A的5'侧翼区域加上5'非翻译区(5'-UTR),以阐明其调控机制。通过荧光素酶报告基因检测对这些区域进行功能剖析表明,一组调控元件在+320至+453之间充当强抑制因子。将该片段以正向和反向插入异源猿猴病毒40(SV40)启动子与荧光素酶基因之间,会大幅降低荧光素酶活性,但插入到SV40启动子上游则不会。这表明该片段必须位于5'-UTR中才能有效发挥作用。用该片段的序列在数据库中进行搜索,未发现任何已知的DNA结合因子位点。电泳凝胶迁移率变动分析(EMSA)实验表明,未知因子与+408至+429片段结合。将该片段插入SV40启动子和报告基因之间会强烈抑制荧光素酶活性。竞争性EMSA表明,核苷酸+413至+427之间的区域包含未知因子的结合位点,因此被视为抑制元件。该元件中的诱变显著恢复了报告基因活性。这些结果表明,5'-UTR中的+320至+453片段,尤其是抑制元件+413至+427,参与了Pax5基因表达的调控。

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