Ciaffi M, Paolacci A R, Dominici L, Tanzarella O A, Porceddu E
Department of Agrobiology and Agrochemistry, University of Tuscia, 01100, Viterbo, Italy.
Gene. 2001 Mar 7;265(1-2):147-56. doi: 10.1016/s0378-1119(01)00348-1.
The organisation of the durum wheat genomic sequence (3.5 kb) coding for protein disulfide isomerase (PDI), deduced by comparison between genomic fragments and cDNA sequences (1.5 kb) isolated from immature caryopses, is described. The gene structure consists of ten exons and nine introns. The presence of consensus sequences involved in splicing, such as intron-exon junctions and branchpoint, has been observed and discussed. Although the deduced wheat PDI amino acid sequence exhibited an overall identity of only 31% to that of human PDI, their modular architecture in terms of number, size, location and secondary structure-propensities of the constituent domains are remarkably similar. The comparison of the amino acid sequences with the eight available plant PDI-like sequences showed a high identity with four of them and low with the remaining ones. Analyses of transcription levels showed that the PDI mRNA was present in all analysed tissues, with much higher expression in immature caryopses.
本文描述了通过比较基因组片段与从未成熟颖果中分离的cDNA序列(1.5 kb)推导得出的编码蛋白质二硫键异构酶(PDI)的硬粒小麦基因组序列(3.5 kb)的组织情况。该基因结构由十个外显子和九个内含子组成。已观察并讨论了参与剪接的共有序列的存在情况,如内含子 - 外显子接头和分支点。尽管推导得出的小麦PDI氨基酸序列与人类PDI的整体同一性仅为31%,但就组成结构域的数量、大小、位置和二级结构倾向而言,它们的模块化结构非常相似。将氨基酸序列与八个可用的植物PDI样序列进行比较,结果显示与其中四个具有高度同一性,与其余序列的同一性较低。转录水平分析表明,PDI mRNA存在于所有分析的组织中,在未成熟颖果中的表达要高得多。