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本文引用的文献

1
5-methylcytosine-DNA glycosylase activity is present in a cloned G/T mismatch DNA glycosylase associated with the chicken embryo DNA demethylation complex.5-甲基胞嘧啶-DNA糖基化酶活性存在于一种与鸡胚DNA去甲基化复合物相关的克隆的G/T错配DNA糖基化酶中。
Proc Natl Acad Sci U S A. 2000 May 9;97(10):5135-9. doi: 10.1073/pnas.100107597.
2
Symmetric and asymmetric DNA methylation in the human IGF2-H19 imprinted region.人类IGF2-H19印记区域中的对称和不对称DNA甲基化
Genomics. 2000 Mar 1;64(2):132-43. doi: 10.1006/geno.1999.6094.
3
Modulation of DNA binding protein affinity directly affects target site demethylation.DNA结合蛋白亲和力的调节直接影响靶位点去甲基化。
Mol Cell Biol. 2000 Apr;20(7):2343-9. doi: 10.1128/MCB.20.7.2343-2349.2000.
4
DNA methylation analysis of the promoter region of the human telomerase reverse transcriptase (hTERT) gene.人类端粒酶逆转录酶(hTERT)基因启动子区域的DNA甲基化分析
Cancer Res. 1999 Dec 15;59(24):6087-90.
5
DNA methylation profile of the mouse skeletal alpha-actin promoter during development and differentiation.发育和分化过程中小鼠骨骼肌α-肌动蛋白启动子的DNA甲基化谱
Mol Cell Biol. 1999 Jan;19(1):164-72. doi: 10.1128/MCB.19.1.164.
6
Evidence that protein binding specifies sites of DNA demethylation.蛋白质结合决定DNA去甲基化位点的证据。
Mol Cell Biol. 1999 Jan;19(1):46-56. doi: 10.1128/MCB.19.1.46.
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Bisulfite sequencing in preimplantation embryos: DNA methylation profile of the upstream region of the mouse imprinted H19 gene.植入前胚胎中的亚硫酸氢盐测序:小鼠印记基因H19上游区域的DNA甲基化图谱
Genomics. 1998 Jul 15;51(2):182-90. doi: 10.1006/geno.1998.5371.
8
Expression of DNA-dependent protein kinase holoenzyme upon induction of lymphocyte differentiation and V(D)J recombination.淋巴细胞分化和V(D)J重组诱导后DNA依赖性蛋白激酶全酶的表达。
Eur J Biochem. 1996 Nov 1;241(3):931-40. doi: 10.1111/j.1432-1033.1996.00931.x.
9
Nucleosomal arrangement of HIV-1 DNA: maps generated from an integrated genome and an EBV-based episomal model.HIV-1 DNA的核小体排列:从整合基因组和基于EBV的附加型模型生成的图谱
J Mol Biol. 1996 Mar 1;256(3):503-16. doi: 10.1006/jmbi.1996.0104.
10
Nuclear extracts of chicken embryos promote an active demethylation of DNA by excision repair of 5-methyldeoxycytidine.鸡胚的核提取物通过5-甲基脱氧胞苷的切除修复促进DNA的主动去甲基化。
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由蛋白质结合所确定的染色体DNA去甲基化。

Chromosomal DNA demethylation specified by protein binding.

作者信息

Lin I G, Hsieh C L

机构信息

Department of Urology, University of Southern California, Norris Cancer Center, Los Angeles 90033, USA.

出版信息

EMBO Rep. 2001 Feb;2(2):108-12. doi: 10.1093/embo-reports/kve023.

DOI:10.1093/embo-reports/kve023
PMID:11258701
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1083819/
Abstract

In the present study, we utilize the well-characterized Escherichia coli lac repressor/operator system to demonstrate that protein binding can lead to demethylation at the binding sites in the chromosome. Similar to the findings using the episome, we found that the presence of LacI in the cells can lead to demethylation of methylated lacO in the chromosome and the LacI inhibitor, isopropyl-beta-D-thiogalactopyranoside (IPTG), can prevent demethylation of the methylated lacO. The lacO sites become progressively more demethylated over time with the presence of LacI, supporting the role of protein occupancy in demethylation targeting. These results validate our earlier conclusions using a stable episomal system, and establish for the first time that protein binding can specify sites of demethylation in the chromosome.

摘要

在本研究中,我们利用特征明确的大肠杆菌乳糖阻遏物/操纵子系统来证明蛋白质结合可导致染色体上结合位点的去甲基化。与使用附加体的研究结果相似,我们发现细胞中LacI的存在可导致染色体上甲基化的lacO去甲基化,而LacI抑制剂异丙基-β-D-硫代半乳糖苷(IPTG)可阻止甲基化的lacO去甲基化。随着时间的推移,在LacI存在的情况下,lacO位点的去甲基化程度逐渐增加,这支持了蛋白质占据在去甲基化靶向中的作用。这些结果证实了我们早期使用稳定附加体系统得出的结论,并首次证明蛋白质结合可确定染色体上去甲基化的位点。