Cheng S, Yan B, Ma Y
Beijing Tuberculosis & Thoracic Tumor Research Institute, Beijing 101149.
Zhonghua Jie He He Hu Xi Za Zhi. 1998 Jan;21(1):37-9.
To clone the rpoB gene of M. tuberculosis.
Screening the rpoB gene of M. tuberculosis from M. tuberculosis genomic DNA library by using the rpoB gene conservative region PCR product as a probe.
411 bp products were seen after amplification of H37Ra DNA. The cloning and sequencing results indicated that the 411 bp products were homogeneous to M. tuberculosis rpoB gene. 12,000 clones of M. tuberculosis genomic DNA library were screened by hybridization using the 411 bp product as a probe and 7 clones seemed positive, 3 clones were real positive after the second hybridization. 1 of them carried a 3.8 kb insert fragment. The preliminary restriction map of the 3.8 kb segment was made. The regions which were found homogeneous to the probe to the end of this cloned fragment were 1 and 2.8 kb.
In comparison with the open reading frame of H37Rv rpoB gene, the 3.8 kb segment cloned here covers larger portion of entire rpoB gene of M. tuberculosis. This study will provide a useful tool to study the resistant mechanism of rifampin and other rifamycin compounds to M. tuberculosis.
克隆结核分枝杆菌的rpoB基因。
以rpoB基因保守区PCR产物为探针,从结核分枝杆菌基因组DNA文库中筛选结核分枝杆菌的rpoB基因。
对H37Ra DNA进行扩增后可见411 bp的产物。克隆和测序结果表明,该411 bp产物与结核分枝杆菌rpoB基因同源。以该411 bp产物为探针,通过杂交筛选结核分枝杆菌基因组DNA文库的12000个克隆,7个克隆呈阳性,二次杂交后3个克隆为真阳性。其中1个克隆携带一个3.8 kb的插入片段。制作了该3.8 kb片段的初步限制性图谱。该克隆片段末端与探针同源的区域为1 kb和2.8 kb。
与H37Rv rpoB基因的开放阅读框相比,此处克隆的3.8 kb片段覆盖了结核分枝杆菌整个rpoB基因的较大部分。本研究将为研究利福平和其他利福霉素类化合物对结核分枝杆菌的耐药机制提供有用的工具。