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来自假单胞菌属CF600菌株的dmpFG编码的4-羟基-2-酮戊酸醛缩酶-醛脱氢酶(酰化)的结晶及初步X射线分析

Crystallization and preliminary X-ray analysis of dmpFG-encoded 4-hydroxy-2-ketovalerate aldolase--aldehyde dehydrogenase (acylating) from Pseudomonas sp. strain CF600.

作者信息

Manjasetty B A, Croteau N, Powlowski J, Vrielink A

机构信息

Department of Physics, Government Science College, Bangalore 560 012, India.

出版信息

Acta Crystallogr D Biol Crystallogr. 2001 Apr;57(Pt 4):582-5. doi: 10.1107/s0907444901000439.

Abstract

The final two steps of the meta-cleavage pathway for catechol degradation in Pseudomonas sp. strain CF600 involve the conversion of 4-hydroxy-2-ketovalerate to pyruvate and acetyl coenzyme A by the enzymes 4-hydroxy-2-ketovalerate aldolase and NAD(+)-dependent acylating aldehyde dehydrogenase. Biochemical studies indicate that these two enzymes comprise a bifunctional heterodimer (DmpFG, molecular mass 71 kDa) and suggest that the product of the aldolase reaction is transferred to the dehydrogenase active site via a channeling mechanism. Crystals of the DmpFG complex grow in multiple fan-like clusters of thin plates by the hanging-drop method and are improved by streak-seeding. The crystals belong to the orthorhombic space group P2(1)2(1)2(1), with unit-cell parameters a = 102.0, b = 140.7, c = 191.3 A, and diffract to 2.1 A resolution. The asymmetric unit contains four DmpFG heterodimers. Heavy-atom derivative screening identified three isomorphous derivatives.

摘要

在假单胞菌属CF600菌株中,儿茶酚降解的间位裂解途径的最后两步涉及通过4-羟基-2-酮戊酸醛缩酶和NAD(+)依赖性酰化醛脱氢酶将4-羟基-2-酮戊酸转化为丙酮酸和乙酰辅酶A。生化研究表明,这两种酶构成一个双功能异源二聚体(DmpFG,分子量71 kDa),并表明醛缩酶反应的产物通过通道化机制转移到脱氢酶活性位点。DmpFG复合物的晶体通过悬滴法在多个扇形薄平板簇中生长,并通过条纹接种得到改善。这些晶体属于正交晶系空间群P2(1)2(1)2(1),晶胞参数a = 102.0、b = 140.7、c = 191.3 Å,衍射分辨率为2.1 Å。不对称单元包含四个DmpFG异源二聚体。重原子衍生物筛选鉴定出三种同晶型衍生物。

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