Munagala N, Basus V J, Wang C C
Department of Pharmaceutical Chemistry, University of California, San Francisco, California 94143-0446, USA.
Biochemistry. 2001 Apr 10;40(14):4303-11. doi: 10.1021/bi0026932.
The hypoxanthine-guanine-xanthine phosphoribosyltransferase (HGXPRTase), a type I PRTase, from Tritrichomonas foetus, is a potential target for antitritrichomonal chemotherapy. Structural data on all the type I PRTases reveal a highly flexible, 11-14-amino acid loop, presumably covering the active site. With the exception of a highly conserved Ser-Tyr dipeptide, the other amino acids constituting the loop vary widely among different PRTases. The roles of the conserved Ser73 and Tyr74 residues in the loop and the dynamics of the loop in T. foetus HGXPRTase were investigated using site-directed mutants, stop-flow kinetics, chemical modification, and two-dimensional (1)H-(15)N heteronuclear NMR relaxation experiments. S73A, Y74F, and Y74E mutants of HGXPRTase exhibited a 5-7-fold increase in K(m) for guanine and a 3-5-fold increase in K(m) for PRPP compared to that of the wild type, reflecting the decreased affinity of binding for the two substrates. The k(cat)'s for these mutant-catalyzed reactions, however, do not change appreciably from that of the wild-type enzyme. Stopped-flow fluorescence with a Y74W mutant showed no apparent quenching by adding either PRPP or GMP alone. When both PRPP and guanine were added together, however, the fluorescence was rapidly quenched, followed by a slow recovery as the enzyme-catalyzed reaction progressed, suggesting movement of the loop during catalysis. In the presence of 9-deazaguanine and PRPP, the rapidly quenched fluorescence was not recovered, suggesting a closed loop form. The accessibility of Trp74 in the flexible loop of the mutant enzyme was also analyzed using N-bromosuccinimide (NBS), which reacts specifically with the tryptophan residue. NBS reacted with the only tryptophan in the Y74W mutant enzyme and rendered the enzyme inactive. GMP or PRPP alone failed to protect the enzyme from NBS inactivation. However, the presence of both 9-deazaguanine and PPRP protected the enzyme, allowing it to retain up to 70% of its activity. An S75H mutant, labeled with [(15)N]histidine, was used in the (1)H-(15)N NMR study. Spectra obtained in the presence of enzyme substrates indicated an apparent stabilization of the loop only in the presence of 9-deazaguanine and PRPP. These experimental results thus clearly demonstrated stabilization of the flexible loop upon binding of both PRPP and guanine and suggested its involvement in enzyme catalysis.
来自胎儿三毛滴虫的次黄嘌呤 - 鸟嘌呤 - 黄嘌呤磷酸核糖基转移酶(HGXPRTase)是一种I型磷酸核糖基转移酶(PRTase),是抗三毛滴虫化疗的潜在靶点。所有I型PRTase的结构数据显示,存在一个高度灵活的11 - 14个氨基酸的环,推测该环覆盖活性位点。除了一个高度保守的丝氨酸 - 酪氨酸二肽外,构成该环的其他氨基酸在不同的PRTase之间差异很大。使用定点突变体、停流动力学、化学修饰和二维(1)H - (15)N异核NMR弛豫实验,研究了胎儿三毛滴虫HGXPRTase中环中保守的丝氨酸73和酪氨酸74残基的作用以及该环的动力学。与野生型相比,HGXPRTase的S73A、Y74F和Y74E突变体对鸟嘌呤的K(m)增加了5 - 7倍,对PRPP的K(m)增加了3 - 5倍,这反映了对这两种底物结合亲和力的降低。然而,这些突变体催化反应的k(cat)与野生型酶相比没有明显变化。用Y74W突变体进行的停流荧光实验表明,单独添加PRPP或GMP时没有明显的淬灭现象。然而,当同时添加PRPP和鸟嘌呤时,荧光迅速淬灭,随后随着酶催化反应的进行缓慢恢复,这表明在催化过程中环发生了移动。在9 - 脱氮鸟嘌呤和PRPP存在的情况下,迅速淬灭的荧光没有恢复,表明是闭环形式。还使用特异性与色氨酸残基反应的N - 溴代琥珀酰亚胺(NBS)分析了突变酶柔性环中色氨酸74的可及性。NBS与Y74W突变体酶中唯一的色氨酸反应,使酶失活。单独的GMP或PRPP都不能保护酶免受NBS失活的影响。然而,9 - 脱氮鸟嘌呤和PPRP同时存在时能保护酶,使其保留高达70%的活性。用[(15)N]组氨酸标记的S75H突变体用于(1)H - (15)N NMR研究。在酶底物存在下获得的光谱表明,仅在9 - 脱氮鸟嘌呤和PRPP存在时环明显稳定。因此,这些实验结果清楚地证明了PRPP和鸟嘌呤结合后柔性环的稳定,并表明其参与酶催化。