Silinski P, Allingham M J, Fitzgerald M C
Department of Chemistry, Duke University, Durham, North Carolina 27708, USA.
Biochemistry. 2001 Apr 10;40(14):4493-502. doi: 10.1021/bi002752b.
4-Oxalocrotonate tautomerase (4-OT) is a bacterial enzyme that is comprised of 6 identical 62 amino acid subunits. The 4-OT enzyme is an attractive model system in which to study the interrelationship between protein folding, subunit assembly, and catalytic function. Here we report on the GuHCl-induced equilibrium unfolding properties of wild-type 4-OT using catalytic activity measurements and using far-UV circular dichroism (CD) spectroscopy. We demonstrate that the unfolding of wild-type 4-OT in 50 mM phosphate buffers containing 6 M GuHCl is reversible at pHs 6.0, 7.4, and 8.5; and we find that there is both an enzyme concentration dependence and a pH dependence to the equilibrium unfolding properties of 4-OT. Our data suggests that the GuHCl-induced unfolding of 4-OT in 50 mM phosphate buffer at pH 8.5 can be modeled as a two-state process involving folded hexamer and unfolded monomer. On the basis of this model, we determined a free-energy value for the unfolding of 4-OT at pH 8.5 to be 68.7 +/- 3.2 kcal/mol under standard state conditions (1 M hexamer). In 50 mM phosphate buffers at pHs 6.0 and 7.4, only the catalytic activity denaturation curves are consistent with a two-state folding mechanism. At the lower pHs the far-UV-CD transitions are not well described by a two-state model. Our results at pHs 6.0 and 7.4 suggest that intermediate state(s) are populated in the equilibrium unfolding reaction at these lower pHs and that these intermediate state(s) have some helical content but no measurable catalytic activity.
4-草酰巴豆酸互变异构酶(4-OT)是一种细菌酶,由6个相同的62个氨基酸亚基组成。4-OT酶是一个极具吸引力的模型系统,可用于研究蛋白质折叠、亚基组装和催化功能之间的相互关系。在此,我们报告了使用催化活性测量和远紫外圆二色性(CD)光谱对野生型4-OT进行盐酸胍(GuHCl)诱导的平衡去折叠特性研究。我们证明,在含有6 M GuHCl的50 mM磷酸盐缓冲液中,野生型4-OT在pH 6.0、7.4和8.5时的去折叠是可逆的;并且我们发现4-OT的平衡去折叠特性既存在酶浓度依赖性,也存在pH依赖性。我们的数据表明,在pH 8.5的50 mM磷酸盐缓冲液中,GuHCl诱导的4-OT去折叠可以模拟为一个涉及折叠六聚体和未折叠单体的两态过程。基于该模型,我们确定在标准状态条件(1 M六聚体)下,pH 8.5时4-OT去折叠的自由能值为68.7 +/- 3.2 kcal/mol。在pH 6.0和7.4的50 mM磷酸盐缓冲液中,只有催化活性变性曲线与两态折叠机制一致。在较低pH值下,远紫外-CD转变不能很好地用两态模型描述。我们在pH 6.0和7.4时的结果表明,在这些较低pH值的平衡去折叠反应中存在中间态,并且这些中间态具有一些螺旋含量,但没有可测量的催化活性。