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两种软体动物血蓝蛋白基因的结构:对基因进化的意义

Structures of two molluscan hemocyanin genes: significance for gene evolution.

作者信息

Lieb B, Altenhein B, Markl J, Vincent A, van Olden E, van Holde K E, Miller K I

机构信息

Institute of Zoology, Johannes Gutenberg University of Mainz, D-55099 Mainz, Germany.

出版信息

Proc Natl Acad Sci U S A. 2001 Apr 10;98(8):4546-51. doi: 10.1073/pnas.071049998. Epub 2001 Apr 3.

Abstract

We present here the description of genes coding for molluscan hemocyanins. Two distantly related mollusks, Haliotis tuberculata and Octopus dofleini, were studied. The typical architecture of a molluscan hemocyanin subunit, which is a string of seven or eight globular functional units (FUs, designated a to h, about 50 kDa each), is reflected by the gene organization: a series of eight structurally related coding regions in Haliotis, corresponding to FU-a to FU-h, with seven highly variable linker introns of 174 to 3,198 bp length (all in phase 1). In Octopus seven coding regions (FU-a to FU-g) are found, separated by phase 1 introns varying in length from 100 bp to 910 bp. Both genes exhibit typical signal (export) sequences, and in both cases these are interrupted by an additional intron. Each gene also contains an intron between signal peptide and FU-a and in the 3' untranslated region. Of special relevance for evolutionary considerations are introns interrupting those regions that encode a discrete functional unit. We found that five of the eight FUs in Haliotis each are encoded by a single exon, whereas FU-f, FU-g, and FU-a are encoded by two, three and four exons, respectively. Similarly, in Octopus four of the FUs each correspond to an uninterrupted exon, whereas FU-b, FU-e, and FU-f each contain a single intron. Although the positioning of the introns between FUs is highly conserved in the two mollusks, the introns within FUs show no relationship either in location nor phase. It is proposed that the introns between FUs were generated as the eight-unit polypeptide evolved from a monomeric precursor, and that the internal introns have been added later. A hypothesis for evolution of the ring-like quaternary structure of molluscan hemocyanins is presented.

摘要

我们在此展示对编码软体动物血蓝蛋白的基因的描述。研究了两种亲缘关系较远的软体动物,即皱纹盘鲍和巨乌贼。软体动物血蓝蛋白亚基的典型结构是一串七个或八个球状功能单元(FUs,分别命名为a至h,每个约50 kDa),这在基因组织中有所体现:皱纹盘鲍中有一系列八个结构相关的编码区,对应于FU-a至FU-h,其间有七个长度在174至3198 bp之间的高度可变的连接内含子(均为1相)。在巨乌贼中发现了七个编码区(FU-a至FU-g),由长度从100 bp到910 bp不等的1相内含子隔开。这两个基因都具有典型的信号(输出)序列,并且在这两种情况下,这些序列都被一个额外的内含子打断。每个基因在信号肽和FU-a之间以及3'非翻译区也都含有一个内含子。对于进化考虑特别相关的是打断那些编码离散功能单元区域的内含子。我们发现皱纹盘鲍的八个FUs中有五个各自由一个外显子编码,而FU-f、FU-g和FU-a分别由两个、三个和四个外显子编码。同样,在巨乌贼中,四个FUs各自对应一个不间断的外显子,而FU-b、FU-e和FU-f各自包含一个内含子。尽管两个软体动物中FUs之间内含子的定位高度保守,但FUs内部的内含子在位置和相位上均无关联。有人提出,FUs之间的内含子是在八聚体多肽从单体前体进化过程中产生的,而内部内含子是后来添加的。本文提出了一个关于软体动物血蓝蛋白环状四级结构进化的假说。

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