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16号染色体上炎症性肠病易感性位点与溃疡性结肠炎和克罗恩病的关联

Association of susceptibility locus for inflammatory bowel disease on chromosome 16 with both ulcerative colitis and Crohn's disease.

作者信息

Farmer M, Hunt L, Eichenberger M R, Petras R E, Janosky J E, Galandiuk S

机构信息

Department of Surgery, University of Louisville, Kentucky 40292, USA.

出版信息

Dig Dis Sci. 2001 Mar;46(3):632-6. doi: 10.1023/a:1005623904826.

DOI:10.1023/a:1005623904826
PMID:11318544
Abstract

A susceptibility locus for inflammatory bowel disease (IBD) on chromosome 16 (IBD1) has been linked to Crohn's disease in genome-wide linkage studies. We performed a case-control study with two markers for this locus using leukocyte DNA from 127 Crohn's patients, 83 ulcerative colitis patients, and 74 control patients. Allele, genotype, and haplotype frequencies of the polymerase chain reaction products were determined using autoradiography. Haplotype frequencies differed for ulcerative colitis and Crohn's disease, particularly for haplotype CC (22% ulcerative colitis vs 10% Crohn's disease, P = 0.002 Chi2 = 10.0) and haplotype CD (18% Crohn's disease vs 9% ulcerative colitis, P = 0.025 Chi2 = 5.02). These data demonstrate the association of the IBD1 locus with both ulcerative colitis and Crohn's disease in a group of unrelated IBD patients. The use of such microsatellite markers when combined with others, might help distinguish ulcerative colitis from Crohn's disease in patients with ambiguous clinical and histological features.

摘要

在全基因组连锁研究中,16号染色体上的炎症性肠病(IBD)易感基因座(IBD1)已与克罗恩病相关联。我们使用来自127例克罗恩病患者、83例溃疡性结肠炎患者和74例对照患者的白细胞DNA,对该基因座的两个标记进行了病例对照研究。使用放射自显影法测定聚合酶链反应产物的等位基因、基因型和单倍型频率。溃疡性结肠炎和克罗恩病的单倍型频率不同,特别是单倍型CC(溃疡性结肠炎为22%,克罗恩病为10%,P = 0.002,卡方 = 10.0)和单倍型CD(克罗恩病为18%,溃疡性结肠炎为9%,P = 0.025,卡方 = 5.02)。这些数据表明,在一组无亲缘关系的IBD患者中,IBD1基因座与溃疡性结肠炎和克罗恩病均相关。当与其他标记结合使用时,此类微卫星标记可能有助于在临床和组织学特征不明确的患者中区分溃疡性结肠炎和克罗恩病。

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本文引用的文献

1
Genetic analysis in Italian families with inflammatory bowel disease supports linkage to the IBD1 locus--a GISC study.一项GISC研究:对意大利炎性肠病家族的基因分析支持与IBD1位点的连锁关系。
Eur J Hum Genet. 1999 Jul;7(5):567-73. doi: 10.1038/sj.ejhg.5200328.
2
A genomewide analysis provides evidence for novel linkages in inflammatory bowel disease in a large European cohort.一项全基因组分析为一个大型欧洲队列中炎症性肠病的新关联提供了证据。
Am J Hum Genet. 1999 Mar;64(3):808-16. doi: 10.1086/302294.
3
Power of association and linkage tests when the disease alleles are unobserved.
当疾病等位基因未被观察到时关联检验和连锁检验的效能。
Am J Hum Genet. 1999 Feb;64(2):641-9. doi: 10.1086/302253.
4
Analysis of Australian Crohn's disease pedigrees refines the localization for susceptibility to inflammatory bowel disease on chromosome 16.对澳大利亚克罗恩病家系的分析,明确了16号染色体上炎症性肠病易感性的定位。
Ann Hum Genet. 1998 Jul;62(Pt 4):291-8. doi: 10.1046/j.1469-1809.1998.6240291.x.
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Inflammatory bowel disease: is it in the genes?炎症性肠病:与基因有关吗?
Gastroenterology. 1998 Nov;115(5):1286-9. doi: 10.1016/s0016-5085(98)70103-9.
6
Genetic analysis of inflammatory bowel disease in a large European cohort supports linkage to chromosomes 12 and 16.对一个大型欧洲队列中的炎症性肠病进行基因分析,支持与12号和16号染色体存在连锁关系。
Gastroenterology. 1998 Nov;115(5):1066-71. doi: 10.1016/s0016-5085(98)70075-7.
7
American families with Crohn's disease have strong evidence for linkage to chromosome 16 but not chromosome 12.患有克罗恩病的美国家庭有充分证据表明该病与16号染色体有关联,而与12号染色体无关。
Gastroenterology. 1998 Nov;115(5):1056-61. doi: 10.1016/s0016-5085(98)70073-3.
8
Linkage and association between inflammatory bowel disease and a locus on chromosome 12.炎症性肠病与12号染色体上一个位点之间的连锁与关联。
Am J Hum Genet. 1998 Jul;63(1):95-100. doi: 10.1086/301929.
9
Evidence of linkage of the inflammatory bowel disease susceptibility locus on chromosome 16 (IBD1) to ulcerative colitis.16号染色体上炎症性肠病易感基因座(IBD1)与溃疡性结肠炎连锁的证据。
J Med Genet. 1998 Mar;35(3):218-21. doi: 10.1136/jmg.35.3.218.
10
Susceptibility locus for inflammatory bowel disease on chromosome 16 has a role in Crohn's disease, but not in ulcerative colitis.16号染色体上的炎症性肠病易感基因座在克罗恩病中起作用,但在溃疡性结肠炎中不起作用。
Hum Mol Genet. 1996 Oct;5(10):1679-83. doi: 10.1093/hmg/5.10.1679.