Degrave W M, Melville S, Ivens A, Aslett M
DBBM - IOC/Fiocruz, Av. Brasil 4365, Manguinhos, 21045-900, Rio de Janeiro, Brazil.
Int J Parasitol. 2001 May 1;31(5-6):532-6. doi: 10.1016/s0020-7519(01)00144-8.
During 1993-1994, scientists from developing and developed countries planned and initiated a number of parasite genome projects and several consortiums for the mapping and sequencing of these medium-sized genomes were established, often based on already ongoing scientific collaborations. Financial and other support came from WHO/TDR, Wellcome Trust and other funding agencies. Thus, the genomes of Plasmodium falciparum, Schistosoma mansoni, Trypanosoma cruzi, Leishmania major, Trypanosoma brucei, Brugia malayi and other pathogenic nematodes are now under study. From an initial phase of network formation, mapping efforts and resource building (EST, GSS, phage, cosmid, BAC and YAC library constructions), sequencing was initiated in gene discovery projects but soon also on a small chromosome, and now on a fully fledged genome scale. Proteomics, functional analysis, genetic manipulation and microarray analysis are ongoing to different degrees in the respective genome initiatives, and as the funding for the whole genome sequencing becomes secured, most of the participating laboratories, apart from larger sequencing centres, become oriented to post-genomics. Bioinformatics networks are being expanded, including in developing countries, for data mining, annotation and in-depth analysis.
在1993年至1994年期间,来自发展中国家和发达国家的科学家规划并启动了多个寄生虫基因组项目,基于已有的科学合作建立了若干用于这些中等规模基因组图谱绘制和测序的联盟。资金及其他支持来自世界卫生组织/热带病研究与培训特别规划署、惠康信托基金会及其他资助机构。因此,恶性疟原虫、曼氏血吸虫、克氏锥虫、硕大利什曼原虫、布氏锥虫、马来布鲁线虫及其他致病性线虫的基因组目前正在研究中。从网络形成、图谱绘制工作及资源建设(EST、GSS、噬菌体、黏粒、BAC和YAC文库构建)的初始阶段开始,测序工作先是在基因发现项目中启动,随后很快也应用于一条小染色体,现在则是在全面的基因组规模上进行。蛋白质组学、功能分析、基因操作及微阵列分析在各自的基因组计划中都在不同程度上开展,随着全基因组测序资金的落实,除了较大的测序中心外,大多数参与实验室都转向了后基因组学研究。生物信息学网络正在扩展,包括在发展中国家,用于数据挖掘、注释及深入分析。