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[利用噬菌体展示技术检测基因中的单核苷酸差异]

[Use of phage display for detecting single-nucleotide differences in genes].

作者信息

Denisov S G, Beliavskaia V A, Voevoda M I

机构信息

Institute of Cytology and Genetics, Siberian Division, Russian Academy of Sciences, Novosibirsk.

出版信息

Mol Gen Mikrobiol Virusol. 2001(2):19-24.

Abstract

Experimental strategy has been developed for selection of mismatched DNA binding phages from library of E. coli f1 filamentous phages carrying random peptide inserts on the surface of bacteriophage particles. The strategy is based on the use of phage display technique, DNA heteroduplexes (with single nucleotide variations), and paramagnetic beads. DNA heteroduplexes have been obtained from biotin-labeled PCR product. During the first stage the phage particles were incubated with DNA heteroduplexes possessing mismatched nucleotides. The next step after elimination of free phages and separation of bound phages from DNA heteroduplexes was subtraction of phages binding with DNA heteroduplexes (without mismatched nucleotides). Phages selected by this method were capable of discriminating DNA heteroduplexes with single nucleotide variations from DNA homoduplexes. Phages immobilized on solid base retain their activity and specificity, and therefore can be used for developing a new screening automated method for detecting point mutations and gene polymorphism.

摘要

已开发出一种实验策略,用于从大肠杆菌f1丝状噬菌体文库中筛选错配DNA结合噬菌体,这些噬菌体在噬菌体颗粒表面携带随机肽插入片段。该策略基于噬菌体展示技术、DNA异源双链体(具有单核苷酸变异)和顺磁珠的使用。DNA异源双链体是从生物素标记的PCR产物中获得的。在第一阶段,将噬菌体颗粒与具有错配核苷酸的DNA异源双链体一起孵育。在去除游离噬菌体并将结合的噬菌体与DNA异源双链体分离后,下一步是减去与DNA异源双链体(无错配核苷酸)结合的噬菌体。通过这种方法选择的噬菌体能够区分具有单核苷酸变异的DNA异源双链体和DNA同源双链体。固定在固体基质上的噬菌体保留其活性和特异性,因此可用于开发一种检测点突变和基因多态性的新型自动化筛选方法。

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